PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010240.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 439aa    MW: 51402.1 Da    PI: 10.0094
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010240.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.91.8e-08416438426
                       ---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                       + Cr+++++  C+y ++CkF+Hg
  TRIDC5AG010240.3 416 KMCRYYQQGLRCPYEGNCKFSHG 438
                       57******88************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MNQISSQTVV PQQKVVSTDT VDQRFDKGRT DSLPQGEPGN ARQQQISSKQ NPAIHLFHQQ  60
FLYQGPSVQH GKPEKTRQQQ ILSRPTTSEQ IFKHPTQHDN HRPTPAQQMF KNPQEHNNHR  120
QQQNKVLPQE GTTKTVSILS RAPCLHYGGS GNAVQQQKVS KPTPMEQIRN QSQPLKREHH  180
NLVLPQEDAK KGTNRVHSID HGKAPCLQYA GPGNAMQQQS SRPALPQQIK NPPQPPKHQH  240
TEVLRQEDGN RTYRVEPVDR RNNNYHNTTY DESAFQRRGT QDAKTHQHGS SGQPHAHGDS  300
QWHQPLRPRI QDFSSRNQEG DYRDHRQTTR EQYNPQERHH HNQHGRGQMI QEQYQPQKIH  360
HQNEHDSWRM NQNQYHPQEN HHQNGHDSWR MNHNQYHPQE NHHQNYRYTQ QFPAPKMCRY  420
YQQGLRCPYE GNCKFSHGS