PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010240.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 573aa    MW: 67396.7 Da    PI: 10.4661
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010240.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.42.4e-08551572526
                       --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                        Cr+++++  C+y ++CkF+Hg
  TRIDC5AG010240.2 551 MCRYYQQGLRCPYEGNCKFSHG 572
                       7******88************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
MGVMFEYLCR KKGDPRGIKG RLCGQRTNAG RIIKESYGTA KQQHTFTVEI FWSKGYKPWP  60
PLHPLLIKGR NLYKDKTMRQ PWPDEKERSR VLEEKHARGF QARKSREVRI HEKEIDKMRR  120
FNRLKDNKSK GKENMNQISS QTVVPQQKVV STDTVDQRFD KGRTDSLPQG EPGNARQQQI  180
SSKQNPAIHL FHQQFLYQGP SVQHGKPEKT RQQQILSRPT TSEQIFKHPT QHDNHRPTPA  240
QQMFKNPQEH NNHRQQQNKV LPQEGTTKTV SILSRAPCLH YGGSGNAVQQ QKVSKPTPME  300
QIRNQSQPLK REHHNLVLPQ EDAKKGTNRV HSIDHGKAPC LQYAGPGNAM QQQSSRPALP  360
QQIKNPPQPP KHQHTEVLRQ EDGNRTYRVE PVDRRNNNYH NTTYDESAFQ RRGTQDAKTH  420
QHGSSGQPHA HGDSQWHQPL RPRIQDFSSR NQEGDYRDHR QTTREQYNPQ ERHHHNQHGR  480
GQMIQEQYQP QKIHHQNEHD SWRMNQNQYH PQENHHQNGH DSWRMNHNQY HPQENHHQNY  540
RYTQQFPAPK MCRYYQQGLR CPYEGNCKFS HGS