PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010240.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 414aa    MW: 48584 Da    PI: 10.0186
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH261.6e-08391413426
                       ---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                       + Cr+++++  C+y ++CkF+Hg
  TRIDC5AG010240.1 391 KMCRYYQQGLRCPYEGNCKFSHG 413
                       57******88************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    
DKGRTDSLPQ GEPGNARQQQ ISSKQNPAIH LFHQQFLYQG PSVQHGKPEK TRQQQILSRP  60
TTSEQIFKHP TQHDNHRPTP AQQMFKNPQE HNNHRQQQNK VLPQEGTTKT VSILSRAPCL  120
HYGGSGNAVQ QQKVSKPTPM EQIRNQSQPL KREHHNLVLP QEDAKKGTNR VHSIDHGKAP  180
CLQYAGPGNA MQQQSSRPAL PQQIKNPPQP PKHQHTEVLR QEDGNRTYRV EPVDRRNNNY  240
HNTTYDESAF QRRGTQDAKT HQHGSSGQPH AHGDSQWHQP LRPRIQDFSS RNQEGDYRDH  300
RQTTREQYNP QERHHHNQHG RGQMIQEQYQ PQKIHHQNEH DSWRMNQNQY HPQENHHQNG  360
HDSWRMNHNQ YHPQENHHQN YRYTQQFPAP KMCRYYQQGL RCPYEGNCKF SHGS