PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5AG009270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 295aa MW: 31119.3 Da PI: 9.9817 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.3 | 7.3e-29 | 229 | 287 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr YYrC + gCp++k+ver+++dp ++++tYeg+H h+ TRIDC5AG009270.1 229 GDKYSWRKYGQKTIKGSPHPRCYYRCGTVkGCPARKHVERATDDPAMLVVTYEGDHCHD 287 59************************6665***************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 295 aa Download sequence |
MAVELMGCGY APHGHAAEAE EQFQEAAAAG LLSLELIISS FSSRAGCAPP LGEMADQAVS 60 RFRRVINILD RTGHARFRRG PVGADADSLT PPPVSSAPPP MPAQAPTPAV SPQLAPQKSM 120 TLDFTKPLKA PAAASVAAPS VTSTSFFSSV TAGGEGSVSK GWSQLVSSGK SPLPAGTKRK 180 QRQQQTRCAH SDAAAGGRCH CSKKRKNRVK YTTRVPTVTS GAADIPGVGD KYSWRKYGQK 240 TIKGSPHPRC YYRCGTVKGC PARKHVERAT DDPAMLVVTY EGDHCHDTWP PAAAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31550.1 | 1e-57 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5AG009270.1 |