PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG008250.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 309aa MW: 34665 Da PI: 6.5957

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG008250.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	22.6	2.1e-07	6	29	17	40
TCR 17 YCeCfaagkkCseeCkCedCkNke 40 YC Cfa+g++Cse C C+ C Nk+ TRIDC5AG008250.6 6 YCVCFASGSQCSELCGCDPCYNKT 29 **********************97 PP
2	TCR	45.6	1.4e-14	68	103	4	39
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++C+Ckks ClkkYC+C++ g+ Cs +CkC+dCkN TRIDC5AG008250.6 68 RKCTCKKSGCLKKYCDCYQGGAGCSINCKCDDCKNP 103 79*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
KLVDCYCVCF ASGSQCSELC GCDPCYNKTI HGVQQNTPPG LPLQVVRPAE GGQNSAEFAR 60 YQIDFFRRKC TCKKSGCLKK YCDCYQGGAG CSINCKCDDC KNPYGKKVGV ILDGKSILAA 120 PTPTPNERNG AEVISSDDDD DDEDDYYMNR PLSPIPPSPV SRESSFQQET LVGVEVHTVN 180 GHLYPKPLTQ VRPESWQLSR RPAEEARGDQ WRYMRRPSED GTSDAMEGHA DPKFHHQRDS 240 NNKQRESHAD NRFSIPRCIE VMNGMADLSP VDKSLAPDVF LDPSNREIFL SLSVDIRTMW 300 LKRKMRSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-26	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG008250.6