PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG008250.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 347aa MW: 38741.6 Da PI: 7.7736

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG008250.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.7	2.6e-14	30	67	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +++C+Ckks+Clk+YC Cfa+g++Cse C C+ C Nk+ TRIDC5AG008250.1 30 CRTCSCKKSRCLKLYCVCFASGSQCSELCGCDPCYNKT 67 789*********************************97 PP
2	TCR	45.4	1.6e-14	106	141	4	39
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++C+Ckks ClkkYC+C++ g+ Cs +CkC+dCkN TRIDC5AG008250.1 106 RKCTCKKSGCLKKYCDCYQGGAGCSINCKCDDCKNP 141 79*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
AVWTAVSPPA EANGSSDRKK KRKAEDGEGC RTCSCKKSRC LKLYCVCFAS GSQCSELCGC 60 DPCYNKTIHG VQQNTPPGLP LQVVRPAEGG QNSAEFARYQ IDFFRRKCTC KKSGCLKKYC 120 DCYQGGAGCS INCKCDDCKN PYGKKVGVIL DGKSILAAPT PTPNERNGAE VISSDDDDDD 180 EDDYYMNRPL SPIPPSPVSR ESSFQQETLV GVEVHTVNGH LYPKPLTQVR PESWQLSRRP 240 AEEARGDQWR YMRRPSEDGT SDAMEGHADP KFHHQRDSNN KQRESHADNR FSIPRCIEVM 300 NGMADLSPVD KSLAPDVFLD PSNREIFLSL SVDIRTMWLK RKMRSLV

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

AVWTAVSPPA EANGSSDRKK KRKAEDGEGC RTCSCKKSRC LKLYCVCFAS GSQCSELCGC  60
DPCYNKTIHG VQQNTPPGLP LQVVRPAEGG QNSAEFARYQ IDFFRRKCTC KKSGCLKKYC  120
DCYQGGAGCS INCKCDDCKN PYGKKVGVIL DGKSILAAPT PTPNERNGAE VISSDDDDDD  180
EDDYYMNRPL SPIPPSPVSR ESSFQQETLV GVEVHTVNGH LYPKPLTQVR PESWQLSRRP  240
AEEARGDQWR YMRRPSEDGT SDAMEGHADP KFHHQRDSNN KQRESHADNR FSIPRCIEVM  300
NGMADLSPVD KSLAPDVFLD PSNREIFLSL SVDIRTMWLK RKMRSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-37	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG008250.1