PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG006670.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 771aa    MW: 83555.5 Da    PI: 6.7418
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG006670.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.17.1e-093333157
                      HHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox 31 eeLAkkl....gLterqVkvWFqNrRakekk 57
                      +++ + +    +++ +q+kvWFqNrR +ek+
  TRIDC5AG006670.4  3 QQIIRDCpilcNIEPKQIKVWFQNRRCREKQ 33
                      55555555556******************97 PP
2START161.37.5e-511263314204
                       HHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
             START   4 eeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                       ee+++++++ka+ ++  Wv++  +++g++++ +++ s+++ g a+ra+g+v  +++  v+e+l+d++ W ++++ +++l v  +g  g+++l+
  TRIDC5AG006670.4 126 EETLTAFLSKATGTAVEWVQMMGMKPGPDSIGIIAVSHNCIGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDILHVFPTGngGTIELI 217
                       68899***************************************************.8888888888************************** PP

                       EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHH CS
             START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrs 183
                       +++++a+++l++ Rdf+++Ry+  l +g++vi+++S+++ +  p+   +++++Rae+lpSg+li+p+++g+s +++v+hvdl++++++++lr+
  TRIDC5AG006670.4 218 YMQTYAPTTLAApRDFWTLRYTCGLDDGSLVICERSLTQSTGGPSgpnTPGFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRP 310
                       **********999****************************9999999********************************************* PP

                       HHHHHHHHHHHHHHHHTXXXX CS
             START 184 lvksglaegaktwvatlqrqc 204
                       l++s  + ++k++ a+l++ +
  TRIDC5AG006670.4 311 LYESPKIVAQKMTIAALRHIR 331
                       ****************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 771 aa     Download sequence    
RRQQIIRDCP ILCNIEPKQI KVWFQNRRCR EKQRKESSRM QTVNRKLTAM NKLLMEENDR  60
LQKQVSRLVY ENASVKSLKT KIHKASAATT DTSCESVVTS GQQQALAAPR PQRDANNPAG  120
LLAIGEETLT AFLSKATGTA VEWVQMMGMK PGPDSIGIIA VSHNCIGVAA RACGLVSLEP  180
TKVAEILKDR PSWYRDCRCV DILHVFPTGN GGTIELIYMQ TYAPTTLAAP RDFWTLRYTC  240
GLDDGSLVIC ERSLTQSTGG PSGPNTPGFI RAEVLPSGYL IRPCEGGGSM IHIVDHVDLD  300
AWSVPEVLRP LYESPKIVAQ KMTIAALRHI RQIAHESSGE IPYGAGRQPA VLRTFSQRLS  360
RGFNDAVSGF PDDGWSLLTS DGAEDITITV NSSPNKLVGS HISPSPLFSA IGGGILCAKA  420
SMLVQDVPPA LLVRFLREHR SEWADPGVDA YSAASLRASP YAVPGLRAGG FMGNQVILPL  480
AHTLEHEEFL EVLRLEGHGF SHDEVLLARD MYLLQLCSGV DENASGACAQ LVFAPIDESF  540
ADDAPLLPSG FRVIPLDTKT DVPSATRTLD LASALEVGSG GALRGSGDSP GGCSTRSVLT  600
IAFQFSFENH LRESVAAMAR QYVRAVMASV QRVAMAIAPS RLGSQIQLKH PPGSPEALTL  660
ASWIGRSYRA HTGEEIRWSD TEEADSPLKL LWNHSDAILC CSLKPAPMFT FGNNAALDML  720
ETTLVNLQDI SLEAILDDEG RKALCAEFSK VMQQVVSRTS LVGCASRAWG G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein