PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG006670.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 905aa MW: 98086 Da PI: 7.1813 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.4 | 2.4e-18 | 77 | 134 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++t+eq+e+Le++++++++ps +r+++ + + +++ +q+kvWFqNrR +ek+ TRIDC5AG006670.3 77 YVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCpilcNIEPKQIKVWFQNRRCREKQ 134 6789****************************************************97 PP | |||||||
2 | START | 160.9 | 9.9e-51 | 227 | 432 | 4 | 204 |
HHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 4 eeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 ee+++++++ka+ ++ Wv++ +++g++++ +++ s+++ g a+ra+g+v +++ v+e+l+d++ W ++++ +++l v +g g+++l+ TRIDC5AG006670.3 227 EETLTAFLSKATGTAVEWVQMMGMKPGPDSIGIIAVSHNCIGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDILHVFPTGngGTIELI 318 68899***************************************************.8888888888************************** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrs 183 +++++a+++l++ Rdf+++Ry+ l +g++vi+++S+++ + p+ +++++Rae+lpSg+li+p+++g+s +++v+hvdl++++++++lr+ TRIDC5AG006670.3 319 YMQTYAPTTLAApRDFWTLRYTCGLDDGSLVICERSLTQSTGGPSgpnTPGFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRP 411 **********999****************************9999999********************************************* PP HHHHHHHHHHHHHHHHTXXXX CS START 184 lvksglaegaktwvatlqrqc 204 l++s + ++k++ a+l++ + TRIDC5AG006670.3 412 LYESPKIVAQKMTIAALRHIR 432 ****************99865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 905 aa Download sequence |
ESERHGDPPQ RSTPRSLLSL PQAMTRHRPW PPSHPPPPPH PHPLRAAAAA ATGSGGGKKM 60 ARLSPGAAAP QVDTGKYVRY TPEQVEALER VYNECPKPSS LRRQQIIRDC PILCNIEPKQ 120 IKVWFQNRRC REKQRKESSR MQTVNRKLTA MNKLLMEEND RLQKQVSRLV YENASVKSLK 180 TKIHKASAAT TDTSCESVVT SGQQQALAAP RPQRDANNPA GLLAIGEETL TAFLSKATGT 240 AVEWVQMMGM KPGPDSIGII AVSHNCIGVA ARACGLVSLE PTKVAEILKD RPSWYRDCRC 300 VDILHVFPTG NGGTIELIYM QTYAPTTLAA PRDFWTLRYT CGLDDGSLVI CERSLTQSTG 360 GPSGPNTPGF IRAEVLPSGY LIRPCEGGGS MIHIVDHVDL DAWSVPEVLR PLYESPKIVA 420 QKMTIAALRH IRQIAHESSG EIPYGAGRQP AVLRTFSQRL SRGFNDAVSG FPDDGWSLLT 480 SDGAEDITIT VNSSPNKLVG SHISPSPLFS AIGGGILCAK ASMLVQDVPP ALLVRFLREH 540 RSEWADPGVD AYSAASLRAS PYAVPGLRAG GFMGNQVILP LAHTLEHEEF LEVLRLEGHG 600 FSHDEVLLAR DMYLLQLCSG VDENASGACA QLVFAPIDES FADDAPLLPS GFRVIPLDTK 660 TDVPSATRTL DLASALEVGS GGALRGSGDS PGGCSTRSVL TIAFQFSFEN HLRESVAAMA 720 RQYVRAVMAS VQRVAMAIAP SRLGSQIQLK HPPGSPEALT LASWIGRSYR AHTGEEIRWS 780 DTEEADSPLK LLWNHSDAIL CCSLKPAPMF TFGNNAALDM LETTLVNLQD ISLEAILDDE 840 GRKALCAEFS KVMQQGFAYL PGGVCKSSMG RQASYEQAVA WKVVGDDVAG APHCLAFMFV 900 NWTFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34710.1 | 0.0 | HD-ZIP family protein |
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Ensembl | TRIDC5AG006670.3 |