PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG006670.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 905aa    MW: 98086 Da    PI: 7.1813
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG006670.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.4e-1877134457
                       -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                         ++t+eq+e+Le++++++++ps  +r+++ + +    +++ +q+kvWFqNrR +ek+
  TRIDC5AG006670.3  77 YVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCpilcNIEPKQIKVWFQNRRCREKQ 134
                       6789****************************************************97 PP

2START160.99.9e-512274324204
                       HHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
             START   4 eeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                       ee+++++++ka+ ++  Wv++  +++g++++ +++ s+++ g a+ra+g+v  +++  v+e+l+d++ W ++++ +++l v  +g  g+++l+
  TRIDC5AG006670.3 227 EETLTAFLSKATGTAVEWVQMMGMKPGPDSIGIIAVSHNCIGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDILHVFPTGngGTIELI 318
                       68899***************************************************.8888888888************************** PP

                       EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHH CS
             START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrs 183
                       +++++a+++l++ Rdf+++Ry+  l +g++vi+++S+++ +  p+   +++++Rae+lpSg+li+p+++g+s +++v+hvdl++++++++lr+
  TRIDC5AG006670.3 319 YMQTYAPTTLAApRDFWTLRYTCGLDDGSLVICERSLTQSTGGPSgpnTPGFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRP 411
                       **********999****************************9999999********************************************* PP

                       HHHHHHHHHHHHHHHHTXXXX CS
             START 184 lvksglaegaktwvatlqrqc 204
                       l++s  + ++k++ a+l++ +
  TRIDC5AG006670.3 412 LYESPKIVAQKMTIAALRHIR 432
                       ****************99865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 905 aa     Download sequence    
ESERHGDPPQ RSTPRSLLSL PQAMTRHRPW PPSHPPPPPH PHPLRAAAAA ATGSGGGKKM  60
ARLSPGAAAP QVDTGKYVRY TPEQVEALER VYNECPKPSS LRRQQIIRDC PILCNIEPKQ  120
IKVWFQNRRC REKQRKESSR MQTVNRKLTA MNKLLMEEND RLQKQVSRLV YENASVKSLK  180
TKIHKASAAT TDTSCESVVT SGQQQALAAP RPQRDANNPA GLLAIGEETL TAFLSKATGT  240
AVEWVQMMGM KPGPDSIGII AVSHNCIGVA ARACGLVSLE PTKVAEILKD RPSWYRDCRC  300
VDILHVFPTG NGGTIELIYM QTYAPTTLAA PRDFWTLRYT CGLDDGSLVI CERSLTQSTG  360
GPSGPNTPGF IRAEVLPSGY LIRPCEGGGS MIHIVDHVDL DAWSVPEVLR PLYESPKIVA  420
QKMTIAALRH IRQIAHESSG EIPYGAGRQP AVLRTFSQRL SRGFNDAVSG FPDDGWSLLT  480
SDGAEDITIT VNSSPNKLVG SHISPSPLFS AIGGGILCAK ASMLVQDVPP ALLVRFLREH  540
RSEWADPGVD AYSAASLRAS PYAVPGLRAG GFMGNQVILP LAHTLEHEEF LEVLRLEGHG  600
FSHDEVLLAR DMYLLQLCSG VDENASGACA QLVFAPIDES FADDAPLLPS GFRVIPLDTK  660
TDVPSATRTL DLASALEVGS GGALRGSGDS PGGCSTRSVL TIAFQFSFEN HLRESVAAMA  720
RQYVRAVMAS VQRVAMAIAP SRLGSQIQLK HPPGSPEALT LASWIGRSYR AHTGEEIRWS  780
DTEEADSPLK LLWNHSDAIL CCSLKPAPMF TFGNNAALDM LETTLVNLQD ISLEAILDDE  840
GRKALCAEFS KVMQQGFAYL PGGVCKSSMG RQASYEQAVA WKVVGDDVAG APHCLAFMFV  900
NWTFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein