PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG006670.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 599aa    MW: 65087.4 Da    PI: 9.0109
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG006670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.11.4e-1884141457
                       -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                         ++t+eq+e+Le++++++++ps  +r+++ + +    +++ +q+kvWFqNrR +ek+
  TRIDC5AG006670.1  84 YVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCpilcNIEPKQIKVWFQNRRCREKQ 141
                       6789****************************************************97 PP
2START1624.6e-512344394204
                       HHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
             START   4 eeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                       ee+++++++ka+ ++  Wv++  +++g++++ +++ s+++ g a+ra+g+v  +++  v+e+l+d++ W ++++ +++l v  +g  g+++l+
  TRIDC5AG006670.1 234 EETLTAFLSKATGTAVEWVQMMGMKPGPDSIGIIAVSHNCIGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDILHVFPTGngGTIELI 325
                       68899***************************************************.8888888888************************** PP

                       EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHH CS
             START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrs 183
                       +++++a+++l++ Rdf+++Ry+  l +g++vi+++S+++ +  p+   +++++Rae+lpSg+li+p+++g+s +++v+hvdl++++++++lr+
  TRIDC5AG006670.1 326 YMQTYAPTTLAApRDFWTLRYTCGLDDGSLVICERSLTQSTGGPSgpnTPGFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRP 418
                       **********999****************************9999999********************************************* PP

                       HHHHHHHHHHHHHHHHTXXXX CS
             START 184 lvksglaegaktwvatlqrqc 204
                       l++s  + ++k++ a+l++ +
  TRIDC5AG006670.1 419 LYESPKIVAQKMTIAALRHIR 439
                       ****************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    
QPPPKKPESE RHGDPPQRST PRSLLSLPQA MTRHRPWPPS HPPPPPHPHP LRAAAAAATG  60
SGGGKKMARL SPGAAAPQVD TGKYVRYTPE QVEALERVYN ECPKPSSLRR QQIIRDCPIL  120
CNIEPKQIKV WFQNRRCREK QRKESSRMQT VNRKLTAMNK LLMEENDRLQ KQVSRLVYEN  180
ASVKSLKTKI HKASAATTDT SCESVVTSGQ QQALAAPRPQ RDANNPAGLL AIGEETLTAF  240
LSKATGTAVE WVQMMGMKPG PDSIGIIAVS HNCIGVAARA CGLVSLEPTK VAEILKDRPS  300
WYRDCRCVDI LHVFPTGNGG TIELIYMQTY APTTLAAPRD FWTLRYTCGL DDGSLVICER  360
SLTQSTGGPS GPNTPGFIRA EVLPSGYLIR PCEGGGSMIH IVDHVDLDAW SVPEVLRPLY  420
ESPKIVAQKM TIAALRHIRQ IAHESSGEIP YGAGRQPAVL RTFSQRLSRG FNDAVSGFPD  480
DGWSLLTSDG AEDITITVNS SPNKLVGSHI SPSPLFSAIG GGILCAKASM LVQDVPPALL  540
VRFLREHRSE WADPGVDAYS AASLRASPYA VPGLRAGGFM GNQVILPLAH TLEHEEVTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein