PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG006300.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 309aa MW: 33689.3 Da PI: 9.7653 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.2 | 1.2e-10 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ ++ ++G g W+tI + R+ ++k++w++ TRIDC5AG006300.3 5 KQKWTAEEEAALKAGIGKHGAGKWRTILKDPEfsnilRYRSNVDLKDKWRN 55 79***********************************99***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MGAPKQKWTA EEEAALKAGI GKHGAGKWRT ILKDPEFSNI LRYRSNVDLK DKWRNMNVTV 60 NASGTRDKVR TTTTTTPTAK KPRSAPKQEN HPTAITTITS DGDDDVVDVK PIIKPIVTFT 120 TGSGNKSLSR LENIILEAVK TLNEPTGSYK TAVANYIEEQ YWPPADFDHV LSAKLNELTS 180 SGKLMKVNRK YRIAPSSSFL EGRSSKMLLL DDIKKEPTKV EKVERDGFTA HTKSQVDAEL 240 ARMRNMSAEE AAAAAARAVA EADAIMAEAE AAMREAEAAE ADAVAAQAFA EAAMLTLKNR 300 SSAKLIIRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 2e-60 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG006300.3 |