PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG005850.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 805aa    MW: 88830.1 Da    PI: 6.2933
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG005850.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.72.2e-2344144198
                        EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                        f+k+lt sd++++g +++p++ ae+       +++++++ +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC5AG005850.16  44 FCKTLTASDTSTHGGFSVPRRSAEKVfppldfSLQPPCQ-ELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFI--W 132
                        99******************************9999996.9************************************************..6 PP

                        SSEE..EEEEE- CS
                 B3  87 rsefelvvkvfr 98 
                        +++ +l+++++ 
  TRIDC5AG005850.16 133 NDNNQLLLGIRH 144
                        767777888876 PP
2Auxin_resp117.51.1e-38170253183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaa+t+s F+++YnPras+seF+++++k++k+++ ++vsvGmRf+m fete+ss rr++Gt++ +sdld+vrWpnS+Wrs+k
  TRIDC5AG005850.16 170 AAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYhTRVSVGMRFRMLFETEESSVRRYMGTITTISDLDSVRWPNSHWRSVK 253
                        79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 805 aa     Download sequence    
MHADAETDEV YAQMTLQPLS PEEQKEPFLP IELGAASKQP TNYFCKTLTA SDTSTHGGFS  60
VPRRSAEKVF PPLDFSLQPP CQELIAKDLH DNEWKFRHIF RGQPKRHLLT TGWSVFVSAK  120
RLVAGDSVIF IWNDNNQLLL GIRHANRPQT IMPSSVLSSD SMHIGLLAAA AHAAATNSRF  180
TIFYNPRASP SEFIIPLAKY VKSVYHTRVS VGMRFRMLFE TEESSVRRYM GTITTISDLD  240
SVRWPNSHWR SVKVGWDEST AGEKQPRVSL WEIEPLTTFP MYPTAFPLRL KRPWASGLPS  300
MHGMFNGSVK NDDFARYSSL MWLGDGDRGA QSLNFQGVGA SPWLQPRMDS PLLGLKPDTY  360
QQMAAAALEE IRTGDPSKQS SALLQFQQTQ NPNGGLNSVY ANHVLQQMQY QAQQSSLQTV  420
QHGHSQYSGN PGFLQSQFQQ LHLHNPPAPP QQGHQVIQQS HQEMQQQLSS GCHRISDIDS  480
SMPGSESASQ SQSSFYQQNL LEGNNDPSLH LHNGFRNFSS QDSSNLVSLP RTDQLMAPEG  540
WPSKRLAVEP LGHIESRSVQ PKHENVNHQS NMSHFAGTLA PQSARDSSSV QAYGANVDNQ  600
FLSSSFAFQD GMAGARGGSS SGTVSMAIPL LRYSGEDLPP ADTLATSSCL GESGTFNSLD  660
NMCGVNPSQD GTFVKVYKSG SPGRSLDITR FSSYYELRSE LEHLFGLEGQ LEDPVRSGWQ  720
LVFVDRENDI LLVGDDPWQE FVNSVGCIKI LSQQEVQQMV RGGEGLLSSA PGARMAQGNV  780
CDGYSGGHDL QNLTGNMASV PPLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein