PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG004160.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 834aa MW: 96171.8 Da PI: 8.1227

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG004160.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.2	1.5e-19	199	280	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5AG004160.2 199 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLSP 280 9**************9999......5789*******9998.9******************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 834 aa Download sequence
RGSSRLMRPC PQYVFIMTGM VTELDKPGAE TADNSTKKRR TCRVADDEGS SVPELHRKKA 60 SKNAAETMSS ASELSKEPVG KQSMTEERPQ PTGDSYEELS SDSIEKNTDG ILADEADKET 120 NSVDHSLQQA KEQNQLHDNV ENNEMVNRNP SESDSDSSSG SDSDSELGKY FYPKFEELEA 180 ARKPEPGMKF QTLEDANGFY STYALLTGFV AKRNSNYRRK KYHIECNRSG KPTPARNPNR 240 KRKINSFERT NCQAKVIVKL TKGQWEFATV RNEHNHPLSP NPSLARFFLS QKHMSSEEKS 300 FLKVLQQSKI PPNKILRIFR RMRSSFGNIS FKKQDPVSSV RSSSENIPSK KKDPISLQCT 360 EQRKTENSDV ESALKHFKEL ELRNPSFFYI KQTDEDNIVR SIFWTDARSR MDYDIFGDFI 420 SVDTTYTTNR HNLPVATIIG INNHGRTLLL GCALLRDGKA ETFKWMFQTL LQVMGGKISE 480 SIITNQDEPL GRAIAEVLPQ VRLRFWKCDV MGKAHERIAA FMAARGNIKL ELDSLVDNSL 540 TEMEFEEGWS SLIERYDASK NEYLQFMWRI RKIWAPVYFR QDFYPFAESL GRSEGMNIVL 600 FRNYVLPKDR IEKFIERYEE IQKTTLKTDD EDRRQAGTVP SCFSLQPIEK HASTIYTRQI 660 FLKVQRELLH STAFDVHVVK KGSVYRLERV FNYENPEFDR NAFEVFVDPV SNTFICQCAK 720 FARDRLLCCH IFRLFTQLGI NEIPAQYIVP RWTDKFKEEK AKQYTEKCLE KADSTARYEM 780 LMSKMADLSK KICSDGTKCN TFMLEFDSIQ EKLLATEGEN PRNNDNCMEI ITTS

Sequence ? help Back to Top

Protein Sequence Length: 834 aa Download sequence

RGSSRLMRPC PQYVFIMTGM VTELDKPGAE TADNSTKKRR TCRVADDEGS SVPELHRKKA  60
SKNAAETMSS ASELSKEPVG KQSMTEERPQ PTGDSYEELS SDSIEKNTDG ILADEADKET  120
NSVDHSLQQA KEQNQLHDNV ENNEMVNRNP SESDSDSSSG SDSDSELGKY FYPKFEELEA  180
ARKPEPGMKF QTLEDANGFY STYALLTGFV AKRNSNYRRK KYHIECNRSG KPTPARNPNR  240
KRKINSFERT NCQAKVIVKL TKGQWEFATV RNEHNHPLSP NPSLARFFLS QKHMSSEEKS  300
FLKVLQQSKI PPNKILRIFR RMRSSFGNIS FKKQDPVSSV RSSSENIPSK KKDPISLQCT  360
EQRKTENSDV ESALKHFKEL ELRNPSFFYI KQTDEDNIVR SIFWTDARSR MDYDIFGDFI  420
SVDTTYTTNR HNLPVATIIG INNHGRTLLL GCALLRDGKA ETFKWMFQTL LQVMGGKISE  480
SIITNQDEPL GRAIAEVLPQ VRLRFWKCDV MGKAHERIAA FMAARGNIKL ELDSLVDNSL  540
TEMEFEEGWS SLIERYDASK NEYLQFMWRI RKIWAPVYFR QDFYPFAESL GRSEGMNIVL  600
FRNYVLPKDR IEKFIERYEE IQKTTLKTDD EDRRQAGTVP SCFSLQPIEK HASTIYTRQI  660
FLKVQRELLH STAFDVHVVK KGSVYRLERV FNYENPEFDR NAFEVFVDPV SNTFICQCAK  720
FARDRLLCCH IFRLFTQLGI NEIPAQYIVP RWTDKFKEEK AKQYTEKCLE KADSTARYEM  780
LMSKMADLSK KICSDGTKCN TFMLEFDSIQ EKLLATEGEN PRNNDNCMEI ITTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	62	KKRRTCRVADDEGSSVPELHRKKASK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-71	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG004160.2