PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG004160.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 836aa MW: 96238.8 Da PI: 8.1575

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG004160.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.2	1.5e-19	201	282	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5AG004160.1 201 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLSP 282 9**************9999......5789*******9998.9******************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 836 aa Download sequence
RRTGARLLSA HATLPPFIMT GMVTELDKPG AETADNSTKK RRTCRVADDE GSSVPELHRK 60 KASKNAAETM SSASELSKEP VGKQSMTEER PQPTGDSYEE LSSDSIEKNT DGILADEADK 120 ETNSVDHSLQ QAKEQNQLHD NVENNEMVNR NPSESDSDSS SGSDSDSELG KYFYPKFEEL 180 EAARKPEPGM KFQTLEDANG FYSTYALLTG FVAKRNSNYR RKKYHIECNR SGKPTPARNP 240 NRKRKINSFE RTNCQAKVIV KLTKGQWEFA TVRNEHNHPL SPNPSLARFF LSQKHMSSEE 300 KSFLKVLQQS KIPPNKILRI FRRMRSSFGN ISFKKQDPVS SVRSSSENIP SKKKDPISLQ 360 CTEQRKTENS DVESALKHFK ELELRNPSFF YIKQTDEDNI VRSIFWTDAR SRMDYDIFGD 420 FISVDTTYTT NRHNLPVATI IGINNHGRTL LLGCALLRDG KAETFKWMFQ TLLQVMGGKI 480 SESIITNQDE PLGRAIAEVL PQVRLRFWKC DVMGKAHERI AAFMAARGNI KLELDSLVDN 540 SLTEMEFEEG WSSLIERYDA SKNEYLQFMW RIRKIWAPVY FRQDFYPFAE SLGRSEGMNI 600 VLFRNYVLPK DRIEKFIERY EEIQKTTLKT DDEDRRQAGT VPSCFSLQPI EKHASTIYTR 660 QIFLKVQREL LHSTAFDVHV VKKGSVYRLE RVFNYENPEF DRNAFEVFVD PVSNTFICQC 720 AKFARDRLLC CHIFRLFTQL GINEIPAQYI VPRWTDKFKE EKAKQYTEKC LEKADSTARY 780 EMLMSKMADL SKKICSDGTK CNTFMLEFDS IQEKLLATEG ENPRNNDNCM EIITTS

Sequence ? help Back to Top

Protein Sequence Length: 836 aa Download sequence

RRTGARLLSA HATLPPFIMT GMVTELDKPG AETADNSTKK RRTCRVADDE GSSVPELHRK  60
KASKNAAETM SSASELSKEP VGKQSMTEER PQPTGDSYEE LSSDSIEKNT DGILADEADK  120
ETNSVDHSLQ QAKEQNQLHD NVENNEMVNR NPSESDSDSS SGSDSDSELG KYFYPKFEEL  180
EAARKPEPGM KFQTLEDANG FYSTYALLTG FVAKRNSNYR RKKYHIECNR SGKPTPARNP  240
NRKRKINSFE RTNCQAKVIV KLTKGQWEFA TVRNEHNHPL SPNPSLARFF LSQKHMSSEE  300
KSFLKVLQQS KIPPNKILRI FRRMRSSFGN ISFKKQDPVS SVRSSSENIP SKKKDPISLQ  360
CTEQRKTENS DVESALKHFK ELELRNPSFF YIKQTDEDNI VRSIFWTDAR SRMDYDIFGD  420
FISVDTTYTT NRHNLPVATI IGINNHGRTL LLGCALLRDG KAETFKWMFQ TLLQVMGGKI  480
SESIITNQDE PLGRAIAEVL PQVRLRFWKC DVMGKAHERI AAFMAARGNI KLELDSLVDN  540
SLTEMEFEEG WSSLIERYDA SKNEYLQFMW RIRKIWAPVY FRQDFYPFAE SLGRSEGMNI  600
VLFRNYVLPK DRIEKFIERY EEIQKTTLKT DDEDRRQAGT VPSCFSLQPI EKHASTIYTR  660
QIFLKVQREL LHSTAFDVHV VKKGSVYRLE RVFNYENPEF DRNAFEVFVD PVSNTFICQC  720
AKFARDRLLC CHIFRLFTQL GINEIPAQYI VPRWTDKFKE EKAKQYTEKC LEKADSTARY  780
EMLMSKMADL SKKICSDGTK CNTFMLEFDS IQEKLLATEG ENPRNNDNCM EIITTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	39	64	KKRRTCRVADDEGSSVPELHRKKASK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-72	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG004160.1