PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG003850.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 158aa MW: 17864.1 Da PI: 10.1831 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 174.3 | 7.6e-54 | 1 | 145 | 31 | 170 |
YABBY 31 lfkvvtvrCGhCtsllsvnlakasql..laaeshldeslkee.lleelkveeenlksnv..ekeesastsvsseklsenedeevprvpp.vir 117 ++++vtvrCGhCt+llsv+l+ +++ +a ++ + k++ + +++++ ++ + ++++s+s++ ++ ++ ++++++ + + r TRIDC5AG003850.4 1 MLNIVTVRCGHCTNLLSVSLRGQMHSpvPPAPQE-SSLSKPNgMNSFIRDHSSVYNNPEfgSSSSSSSSKFRMPTMMFSSQNDLLQEQTlHAR 92 579*****************98876411344443.222333334444444444444333113344444445555555555555555444479* PP YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 PPekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWah+P+ihfgl TRIDC5AG003850.4 93 PPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 145 ***************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MLNIVTVRCG HCTNLLSVSL RGQMHSPVPP APQESSLSKP NGMNSFIRDH SSVYNNPEFG 60 SSSSSSSSKF RMPTMMFSSQ NDLLQEQTLH ARPPEKRQRV PSAYNRFIKE EIRRIKANNP 120 DISHREAFST AAKNWAHYPN IHFGLNPERD DGKRLAVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 5e-46 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG003850.4 |