PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG003850.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 174aa MW: 19489 Da PI: 10.1115 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 174.4 | 7.4e-54 | 1 | 147 | 31 | 170 |
YABBY 31 lfkvvtvrCGhCtsllsvnlakasql.laaeshldeslkee...lleelkveeenlksnv..ekeesastsvsseklsenedeevprvpp.vi 116 ++++vtvrCGhCt+llsv+l+ +++ ++ +++es + + +++++ ++ + ++++s+s++ ++ ++ ++++++ + + TRIDC5AG003850.2 1 MLNIVTVRCGHCTNLLSVSLRGQMHSpVPPAPQVQESSLSKpngMNSFIRDHSSVYNNPEfgSSSSSSSSKFRMPTMMFSSQNDLLQEQTlHA 93 579*****************9877542666677777766554664444444444444333113333444444555555555555555444479 PP YABBY 117 rPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 rPPekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWah+P+ihfgl TRIDC5AG003850.2 94 RPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 147 ****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MLNIVTVRCG HCTNLLSVSL RGQMHSPVPP APQVQESSLS KPNGMNSFIR DHSSVYNNPE 60 FGSSSSSSSS KFRMPTMMFS SQNDLLQEQT LHARPPEKRQ RVPSAYNRFI KEEIRRIKAN 120 NPDISHREAF STAAKNWAHY PNIHFGLNPE RDDGKRLAVD DAAPAAKKIH GFCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 2e-45 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG003850.2 |