PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG002640.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 316aa    MW: 37539.9 Da    PI: 8.1707
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG002640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR135.92.5e-114504691
              FAR1 46 kktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                      k+++++r++r+ tr+gCkak+++ +    g+w v+++  eHnH+lap
  TRIDC5AG002640.1  4 KREDRKRKPRNITRVGCKAKFVIARVAkIGRWFVKDFIDEHNHPLAP 50
                      334789*****************999889***************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MKRKREDRKR KPRNITRVGC KAKFVIARVA KIGRWFVKDF IDEHNHPLAP RDLACFLCSH  60
RRISDEQKAD IIEMESVGIQ KHKIMDVLCM QYGGYDQVGC TTRDIYNFCH RYKQETVAAG  120
DAQTLIRRMM ARQERDPDYF FKYLVGKDGH LKGLFWSDTQ SRLDYEAFGD VVVFDSTYRT  180
NKYNLSFVPF VGLNHHRSTV IFGCGIISHE TNEAYEWMLR TFSEAMAQKH PISVIIDGDL  240
AMQRAIRVVW PDSYHRLCVW HIQQNIVRHL HEDEVREEFR SFIYDSSCIE EHGRKWIEFL  300
QRNEVTSEES WLHQMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1411KREDRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-62FAR1 family protein