PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG002640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 316aa MW: 37539.9 Da PI: 8.1707 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 35.9 | 2.5e-11 | 4 | 50 | 46 | 91 |
FAR1 46 kktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 k+++++r++r+ tr+gCkak+++ + g+w v+++ eHnH+lap TRIDC5AG002640.1 4 KREDRKRKPRNITRVGCKAKFVIARVAkIGRWFVKDFIDEHNHPLAP 50 334789*****************999889***************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MKRKREDRKR KPRNITRVGC KAKFVIARVA KIGRWFVKDF IDEHNHPLAP RDLACFLCSH 60 RRISDEQKAD IIEMESVGIQ KHKIMDVLCM QYGGYDQVGC TTRDIYNFCH RYKQETVAAG 120 DAQTLIRRMM ARQERDPDYF FKYLVGKDGH LKGLFWSDTQ SRLDYEAFGD VVVFDSTYRT 180 NKYNLSFVPF VGLNHHRSTV IFGCGIISHE TNEAYEWMLR TFSEAMAQKH PISVIIDGDL 240 AMQRAIRVVW PDSYHRLCVW HIQQNIVRHL HEDEVREEFR SFIYDSSCIE EHGRKWIEFL 300 QRNEVTSEES WLHQMY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 4 | 11 | KREDRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-62 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG002640.1 |