PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG000810.9 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 1130aa MW: 125114 Da PI: 9.3837 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.7 | 1.1e-07 | 45 | 80 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5AG000810.9 45 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 80 6*****************99.******999.9997665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1130 aa Download sequence |
MSSTRKVRNV NKRYAKINED WPEKDATVVH KNKVRKKKLS DLGSQWSKDE LERFYAAYRK 60 YGKDWRKVAG AVHDRTSDMV EALYNMNRAY LSLPEGTATA AGLIAMMTDH YNILDGSNSD 120 HESNGSPKTS RKPQKRGRAK LQSVSKASDT RYPDLLQSQP ASSSYGCLSL LKKKRSGDLF 180 VGNKPRAVGK RTPRVPVASM YRDDKIGPSN RQAKPDANNG DEEGALAALA LAEVCQRGSP 240 QVSQTSGRSS GQMFLSPGKS IDRKNADSEM GSSKMHGFQV DADYPEGSLG SREAETGDYP 300 KDASYFLNNE GSASGKSKPK VKRSQKRRKK AAHKTDDQFE DDREACSGTE EGCSSRKAKD 360 ISDLDVFGSK GSWPSNKSNK RSRQLFFGDE LSALDALHTL ADISVNILQP SSIAESESSA 420 QFKDGSKDNE SDDKPSVPAA VSLFDKKDKP RKTKKIKRQS EIASNEVVTR KKARLSKDHH 480 HDGSTSDVKQ DDCKCGVKME KKKRKSSTLK ISKDEKNTLK DSEKTEASAE EGKVSSNKGR 540 HTHVSPVSKQ NKSKAQESSP AHADFGKEAM DTVDMTENAI TQQSDSASKS KSRRKLGILK 600 ALAPESKPAE GADDSCDNVS YPVNNVAELK DKLSHCLSSR FLRRWCMSEW FYSAIDYPWF 660 AKSEFVEYLN HVKLGHVPRL TRVEWGVIRS SLGKPRRLSK QFLQEEREKL SQYRESVRQH 720 YAELQSGVRE GLPTDLARPL AVGQRVIACH PKTRELHDGG VLTVDRSRCR VQFDRPELGV 780 EFVMDIDCMP LHPLENFPES LRRQNIVNKY YSSFSEVKFE DRSKEYGGGG APRFIPNGDA 840 FDSIAQAKTT ANEATVAAQQ AMYGQPCTLS QIQEREADIR ALAELSRALD KKEALLVELR 900 HMNEEVSGKQ KDGEIIRDLE HFRKQYAMVL VQLRDSNDHV ASALLCLRQR NTFHGQPTQS 960 YPNKSMENGG ASNRTPDPSS NLFGYINQES GSQVMEIIET SRSKAKTMVD VAVQAMCKVS 1020 EGENAFAKIG EALDNLNLRG TGSGSSILGI RRIPPDSGQA NSDNSATGRF DPAAATNNIS 1080 SPRVLPNGSD SEAQFPSELI SSCVATILMI QNCTEKQYHP AEVAHILDSA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 318 | 330 | KPKVKRSQKRRKK |
2 | 321 | 327 | VKRSQKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG000810.9 |