PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG000810.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 1130aa MW: 125221 Da PI: 9.3522 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.7 | 1.1e-07 | 45 | 80 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5AG000810.7 45 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 80 6*****************99.******999.9997665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1130 aa Download sequence |
MSSTRKVRNV NKRYAKINED WPEKDATVVH KNKVRKKKLS DLGSQWSKDE LERFYAAYRK 60 YGKDWRKVAG AVHDRTSDMV EALYNMNRAY LSLPEGTATA AGLIAMMTDH YNILDGSNSD 120 HESNGSPKTS RKPQKRGRAK LQSVSKASDT RYPDLLQSQP ASSSYGCLSL LKKKRSGDLF 180 VGNKPRAVGK RTPRVPVASM YRDDKIGPSN RQAKPDANNG DEEGALAALA LAEVCQRGSP 240 QVSQTSGRSS GQMFLSPGKS IDRKNADSEM GSSKMHGFQV DADYPEGSLG SREAETGDYP 300 KDASYFLNNE GSASGKSKPK VKRSQKRRKK AAHKTDDQFE DDREACSGTE EGCSSRKAKD 360 ISDLDVFGSK GSWPSNKSNK RSRQLFFGDE LSALDALHTL ADISVNILQP SSIAESESSA 420 QFKDGSKDNE SDDKPSVPAA VSLFDKKDKP RKTKKIKRQS EIASNEVVTR KKARLSKDHH 480 HDGSTSDVKQ DDCKCGVKME KKKRKSSTLK ISKDEKNTLK DSEKTEASAE EGKVSSNKEN 540 AITQQSDSAS KSKSRRKLGI LKALAPESKP AEGADDSCDN VSYPVNNVAE LKDKLSHCLS 600 SRFLRRWCMS EWFYSAIDYP WFAKSEFVEY LNHVKLGHVP RLTRVEWGVI RSSLGKPRRL 660 SKQFLQEERE KLSQYRESVR QHYAELQSGV REGLPTDLAR PLAVGQRVIA CHPKTRELHD 720 GGVLTVDRSR CRVQFDRPEL GVEFVMDIDC MPLHPLENFP ESLRRQNIVN KYYSSFSEVK 780 FEDRSKEYGG GGAPRFIPNG DAFDSIAQAK TTANEATVAA QQAMYGQPCT LSQIQEREAD 840 IRALAELSRA LDKKEALLVE LRHMNEEVSG KQKDGEIIRD LEHFRKQYAM VLVQLRDSND 900 HVASALLCLR QRNTFHGQPT QSYPNKSMEN GGASNRTPDP SSNLFGYINQ ESGSQVMEII 960 ETSRSKAKTM VDVAVQAMCK VSEGENAFAK IGEALDNLNL RGTGSGSSIL GIRRIPPDSG 1020 QANSDNSATG RFDPAAATNN ISSPRVLPNG SDSEAQFPSE LISSCVATIL MIQNCTEKQY 1080 HPAEVAHILD SALSRLQPCS SQNVPIFREI EMCMGIIKNQ MLALIPTPSG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 318 | 330 | KPKVKRSQKRRKK |
2 | 321 | 327 | VKRSQKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 1e-168 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG000810.7 |