PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG000810.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 1164aa MW: 128838 Da PI: 9.3925 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.6 | 1.2e-07 | 45 | 80 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5AG000810.2 45 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 80 6*****************99.******999.9997665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1164 aa Download sequence |
MSSTRKVRNV NKRYAKINED WPEKDATVVH KNKVRKKKLS DLGSQWSKDE LERFYAAYRK 60 YGKDWRKVAG AVHDRTSDMV EALYNMNRAY LSLPEGTATA AGLIAMMTDH YNILDGSNSD 120 HESNGSPKTS RKPQKRGRAK LQSVSKASDT RYPDLLQSQP ASSSYGCLSL LKKKRSGGNK 180 PRAVGKRTPR VPVASMYRDD KIGPSNRQAK PDANNGDEEG ALAALALAEV CQRGSPQVSQ 240 TSGRSSGQMF LSPGKSIDRK NADSEMGSSK MHGFQVDADY PEGSLGSREA ETGDYPKDAS 300 YFLNNEGSAS GKSKPKVKRS QKRRKKAAHK TDDQFEDDRE ACSGTEEGCS SRKAKDISDL 360 DVFGSKGSWP SNKSNKRSRQ LFFGDELSAL DALHTLADIS VNILQPSSIA ESESSAQFKD 420 GSKDNESDDK PSVPAAVSLF DKKDKPRKTK KIKRQSEIAS NEVVTRKKAR LSKDHHHDGS 480 TSDVKQDDCK CGVKMEKKKR KSSTLKISKD EKNTLKDSEK TEASAEEGKV SSNKGRHTHV 540 SPVSKQNKSK AQESSPAHAD FGKEAMDTVD MTENAITQQS DSASKSKSRR KLGILKALAP 600 ESKPAEGADD SCDNVSYPVN NVAELKDKLS HCLSSRFLRR WCMSEWFYSA IDYPWFAKSE 660 FVEYLNHVKL GHVPRLTRVE WGVIRSSLGK PRRLSKQFLQ EEREKLSQYR ESVRQHYAEL 720 QSGVREGLPT DLARPLAVGQ RVIACHPKTR ELHDGGVLTV DRSRCRVQFD RPELGVEFVM 780 DIDCMPLHPL ENFPESLRRQ NIVNKYYSSF SEVKFEDRSK EYGGGGAPRF IPNGDAFDSI 840 AQAKTTANEA TVAAQQAMYG QPCTLSQIQE READIRALAE LSRALDKKEA LLVELRHMNE 900 EVSGKQKDGE IIRDLEHFRK QYAMVLVQLR DSNDHVASAL LCLRQRNTFH GQPTQSYPNK 960 SMENGGASNR TPDPSSNLFG YINQESGSQV MEIIETSRSK AKTMVDVAVQ AMCKVSEGEN 1020 AFAKIGEALD NLNLRGTGSG SSILGIRRIP PDSGQANSDN SATGRFDPAA ATNNISSPRV 1080 LPNGSDSEAQ FPSELISSCV ATILMIQNCT EKQYHPAEVA HILDSALSRL QPCSSQNVPI 1140 FREIEMCMGI IKNQMLALIP TPSG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 314 | 326 | KPKVKRSQKRRKK |
2 | 317 | 323 | VKRSQKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG000810.2 |