PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG000810.17

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 806aa MW: 90087.4 Da PI: 9.7243

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG000810.17	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.2	7.7e-08	41	76	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5AG000810.17 41 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 76 6***************99.****999.9997665 PP

Sequence ? help Back to Top
Protein Sequence Length: 806 aa Download sequence
IFFPRMQLTL FSLSCIILKS ELVLAHMIWY MKKKLSDLGS QWSKDELERF YAAYRKYGKD 60 WRKVAGAVHD RTSDMVEALY NMNRAYLSLP EGTATAAGLI AMMTDHYNIL DGSNSDHESN 120 GSPKTSRKPQ KRGRAKLQSV SKASDTRYPD LLQSQPASSS YGCLSLLKKK RSGDLFVGNK 180 PRAVGKRTPR VPVASMYRDD KIGPSNRQAK PDANNGDEEG ALAALALAEV CQRGSPQVSQ 240 TSGRSSGQMF LSPGKSIDRK NADSEMGSSK MHGFQVDADY PEGSLGSREA ETGDYPKDAS 300 YFLNNEGSAS GKSKPKVKRS QKRRKKAAHK TDDQFEDDRE ACSGTEEGCS SRKAKDISDL 360 DVFGSKGSWP SNKSNKRSRQ LFFGDELSAL DALHTLADIS VNILQPSSIA ESESSAQFKD 420 GSKDNESDDK PSVPAAVSLF DKKDKPRKTK KIKRQSEIAS NEVVTRKKAR LSKDHHHDGS 480 TSDVKQDDCK CGVKMEKKKR KSSTLKISKD EKNTLKDSEK TEASAEEGKV SSNKAMDTVD 540 MTENAITQQS DSASKSKSRR KLGILKALAP ESKPAEGADD SCDNVSYPVN NVAELKDKLS 600 HCLSSRFLRR WCMSEWFYSA IDYPWFAKSE FVEYLNHVKL GHVPRLTRVE WGVIRSSLGK 660 PRRLSKQFLQ EEREKLSQYR ESVRQHYAEL QSGVREGLPT DLARPLAVGQ RVIACHPKTR 720 ELHDGGVLTV DRSRCRVQFD RPELGVEFVM DIDCMPLHPL ENFPESLRRQ NIVNKYYSSF 780 SEVKFEDRSK EYGGGGAPRF IPNVSF

Sequence ? help Back to Top

Protein Sequence Length: 806 aa Download sequence

IFFPRMQLTL FSLSCIILKS ELVLAHMIWY MKKKLSDLGS QWSKDELERF YAAYRKYGKD  60
WRKVAGAVHD RTSDMVEALY NMNRAYLSLP EGTATAAGLI AMMTDHYNIL DGSNSDHESN  120
GSPKTSRKPQ KRGRAKLQSV SKASDTRYPD LLQSQPASSS YGCLSLLKKK RSGDLFVGNK  180
PRAVGKRTPR VPVASMYRDD KIGPSNRQAK PDANNGDEEG ALAALALAEV CQRGSPQVSQ  240
TSGRSSGQMF LSPGKSIDRK NADSEMGSSK MHGFQVDADY PEGSLGSREA ETGDYPKDAS  300
YFLNNEGSAS GKSKPKVKRS QKRRKKAAHK TDDQFEDDRE ACSGTEEGCS SRKAKDISDL  360
DVFGSKGSWP SNKSNKRSRQ LFFGDELSAL DALHTLADIS VNILQPSSIA ESESSAQFKD  420
GSKDNESDDK PSVPAAVSLF DKKDKPRKTK KIKRQSEIAS NEVVTRKKAR LSKDHHHDGS  480
TSDVKQDDCK CGVKMEKKKR KSSTLKISKD EKNTLKDSEK TEASAEEGKV SSNKAMDTVD  540
MTENAITQQS DSASKSKSRR KLGILKALAP ESKPAEGADD SCDNVSYPVN NVAELKDKLS  600
HCLSSRFLRR WCMSEWFYSA IDYPWFAKSE FVEYLNHVKL GHVPRLTRVE WGVIRSSLGK  660
PRRLSKQFLQ EEREKLSQYR ESVRQHYAEL QSGVREGLPT DLARPLAVGQ RVIACHPKTR  720
ELHDGGVLTV DRSRCRVQFD RPELGVEFVM DIDCMPLHPL ENFPESLRRQ NIVNKYYSSF  780
SEVKFEDRSK EYGGGGAPRF IPNVSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	314	326	KPKVKRSQKRRKK
2	317	323	VKRSQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	5e-90	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG000810.17