PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG000810.15 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 810aa MW: 90540.5 Da PI: 9.9104 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.2 | 7.7e-08 | 45 | 80 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5AG000810.15 45 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 80 6*****************99.******999.9997665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 810 aa Download sequence |
MSSTRKVRNV NKRYAKINED WPEKDATVVH KNKVRKKKLS DLGSQWSKDE LERFYAAYRK 60 YGKDWRKVAG AVHDRTSDMV EALYNMNRAY LSLPEGTATA AGLIAMMTDH YNILDGSNSD 120 HESNGSPKTS RKPQKRGRAK LQSVSKASDT RYPDLLQSQP ASSSYGCLSL LKKKRSGDLF 180 VGNKPRAVGK RTPRVPVASM YRDDKIGPSN RQAKPDANNG DEEGALAALA LAEVCQRGSP 240 QVSQTSGRSS GQMFLSPGKS IDRKNADSEM GSSKMHGFQV DADYPEGSLG SREAETGDYP 300 KDASYFLNNE GSASGKSKPK VKRSQKRRKK AAHKTDDQFE DDREACSGTE EGCSSRKAKD 360 ISDLDVFGSK GSWPSNKSNK RSRQLFFGDE LSALDALHTL ADISVNILQP SSIAESESSA 420 QFKDGSKDNE SDDKPSVPAA VSLFDKKDKP RKTKKIKRQS EIASNEVVTR KKARLSKDHH 480 HDGSTSDVKQ DDCKCGVKME KKKRKSSTLK ISKDEKNTLK DSEKTEASAE EGKVSSNKAM 540 DTVDMTENAI TQQSDSASKS KSRRKLGILK ALAPESKPAE GADDSCDNVS YPVNNVAELK 600 DKLSHCLSSR FLRRWCMSEW FYSAIDYPWF AKSEFVEYLN HVKLGHVPRL TRVEWGVIRS 660 SLGKPRRLSK QFLQEEREKL SQYRESVRQH YAELQSGVRE GLPTDLARPL AVGQRVIACH 720 PKTRELHDGG VLTVDRSRCR VQFDRPELGV EFVMDIDCMP LHPLENFPES LRRQNIVNKY 780 YSSFSEVKFE DRSKEYGGGG APRFIPNVSF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 318 | 330 | KPKVKRSQKRRKK |
2 | 321 | 327 | VKRSQKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 2e-90 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG000810.15 |