PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG063860.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 694aa    MW: 74693.9 Da    PI: 7.3197
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG063860.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix62.97.3e-201691787
          trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
                      m+ ++r+++lk+plWe+vs++++e g +rs+k+C+ek+en+ k+y+++k+g+ +r  ++ +t+++f++lea
  TRIDC4BG063860.5  1 MDAAFREAALKGPLWEQVSRRLAEMGHTRSAKKCREKFENVDKYYRRTKDGRTGR--GDGKTYRFFTELEA 69
                      6889*************************************************97..77778******985 PP
2trihelix107.77.5e-34376461187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW+k ev+aLi++r+eme+r+++++ k+plWe++s  mr+ g++rs+k+Ckekwen+nk++kk+ke+++kr +e+s+tcpyf+ql+a
  TRIDC4BG063860.5 376 RWPKAEVHALIQLRTEMETRYQDTAPKGPLWEDISVGMRRLGYNRSSKRCKEKWENINKYFKKVKESSRKR-PEDSKTCPYFHQLDA 461
                       8*********************************************************************8.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    
MDAAFREAAL KGPLWEQVSR RLAEMGHTRS AKKCREKFEN VDKYYRRTKD GRTGRGDGKT  60
YRFFTELEAL HGSSAAHHPP PAHVAVAPPS APAASTIGAY SGVPSAPSRV LQAEPSPPPL  120
LLTHQPVSTE AAACLTTTAA AAVGDASFSD GSDGEDTDET ADGGKRKRRG GSGSGSWGHG  180
GKAMRFFEGL MRQVMERQEA MQSRLLEAIE RRDQDRMIRE EAWRRQEVAR LAREQDALAQ  240
ERAVAASRDA AVVSFIQRIT GQIVPVHAPP SSFPAKPAAT VNSVKPPALQ PTPVASAAPA  300
PPTPRPPVQA QPNVTTPMRT QPQTPPPQPQ QHATPTATEP QPVTPQPQHL QSKEIVVVHA  360
AEQPPVDMAG GASPSRWPKA EVHALIQLRT EMETRYQDTA PKGPLWEDIS VGMRRLGYNR  420
SSKRCKEKWE NINKYFKKVK ESSRKRPEDS KTCPYFHQLD ALYRTKALAS SSSSSPVVHA  480
PVTVLSPVPL SSQTPPPAAQ HVEHGAKSSI TNGNGHGNGN GAAMQVKASN GAGAAAMFPS  540
PVHAAGNGGN NGTATNKLES KQEVIPKETA TVVPPAVAMN HSYGRNDRRD VYDLDSDSMD  600
EDEEDDFDDD DDDDDEEDDA VGVPGGRNIN MPPAQYDAHF LQRQHQQQQH QNHNHNHNVV  660
RPNAANGSGN PPAGNAAPTS APATSGTPFL AMVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-48Trihelix family protein