PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG063860.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 629aa MW: 67417.6 Da PI: 10.4376

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG063860.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.8	3.3e-29	64	148	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+em+ ++r+++lk+plWe+vs++++e g +rs+k+C+ek+en+ k+y+++k+g+ +r ++ +t+++f++lea TRIDC4BG063860.4 64 RWPRQETLALLKIRSEMDAAFREAALKGPLWEQVSRRLAEMGHTRSAKKCREKFENVDKYYRRTKDGRTGR--GDGKTYRFFTELEA 148 8******************************************************************97..77778****985 PP
2	trihelix	107.9	6.5e-34	438	523	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+eme+r+++++ k+plWe++s mr+ g++rs+k+Ckekwen+nk++kk+ke+++kr +e+s+tcpyf+ql+a TRIDC4BG063860.4 438 RWPKAEVHALIQLRTEMETRYQDTAPKGPLWEDISVGMRRLGYNRSSKRCKEKWENINKYFKKVKESSRKR-PEDSKTCPYFHQLDA 523 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MPPFSPPGWR GPAGAPSPIS SRPPAPAPAP APAPGQQHQQ HQQQHHGGEE GERGGSSSAA 60 GGNRWPRQET LALLKIRSEM DAAFREAALK GPLWEQVSRR LAEMGHTRSA KKCREKFENV 120 DKYYRRTKDG RTGRGDGKTY RFFTELEALH GSSAAHHPPP AHVAVAPPSA PAASTIGAYS 180 GVPSAPSRVL QAEPSPPPLL LTHQPVSTEA AACLTTTAAA AVGDASFSDG SDGEDTDETA 240 DGGKRKRRGG SGSGSWGHGG KAMRFFEGLM RQVMERQEAM QSRLLEAIER RDQDRMIREE 300 AWRRQEVARL AREQDALAQE RAVAASRDAA VVSFIQRITG QIVPSVKPPA LQPTPVASAA 360 PAPPTPRPPV QAQPNVTTPM RTQPQTPPPQ PQQHATPTAT EPQPVTPQPQ HLQSKEIVVV 420 HAAEQPPVDM AGGASPSRWP KAEVHALIQL RTEMETRYQD TAPKGPLWED ISVGMRRLGY 480 NRSSKRCKEK WENINKYFKK VKESSRKRPE DSKTCPYFHQ LDALYRTKAL ASSSSSSPVV 540 HAPVTVLSPV PLSSQTPPPA AQHVEHGAKS SITNGNGHGN GNGAAMQVKA SNGAGAAAMF 600 PSPVHAAGNG GNNGTATNKL VRHSRPMHA

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MPPFSPPGWR GPAGAPSPIS SRPPAPAPAP APAPGQQHQQ HQQQHHGGEE GERGGSSSAA  60
GGNRWPRQET LALLKIRSEM DAAFREAALK GPLWEQVSRR LAEMGHTRSA KKCREKFENV  120
DKYYRRTKDG RTGRGDGKTY RFFTELEALH GSSAAHHPPP AHVAVAPPSA PAASTIGAYS  180
GVPSAPSRVL QAEPSPPPLL LTHQPVSTEA AACLTTTAAA AVGDASFSDG SDGEDTDETA  240
DGGKRKRRGG SGSGSWGHGG KAMRFFEGLM RQVMERQEAM QSRLLEAIER RDQDRMIREE  300
AWRRQEVARL AREQDALAQE RAVAASRDAA VVSFIQRITG QIVPSVKPPA LQPTPVASAA  360
PAPPTPRPPV QAQPNVTTPM RTQPQTPPPQ PQQHATPTAT EPQPVTPQPQ HLQSKEIVVV  420
HAAEQPPVDM AGGASPSRWP KAEVHALIQL RTEMETRYQD TAPKGPLWED ISVGMRRLGY  480
NRSSKRCKEK WENINKYFKK VKESSRKRPE DSKTCPYFHQ LDALYRTKAL ASSSSSSPVV  540
HAPVTVLSPV PLSSQTPPPA AQHVEHGAKS SITNGNGHGN GNGAAMQVKA SNGAGAAAMF  600
PSPVHAAGNG GNNGTATNKL VRHSRPMHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	9e-49	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG063860.4