PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG063860.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 666aa    MW: 70930.3 Da    PI: 10.2017
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG063860.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix92.73.6e-2990174187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW++qe+laL+++r+em+ ++r+++lk+plWe+vs++++e g +rs+k+C+ek+en+ k+y+++k+g+ +r  ++ +t+++f++lea
  TRIDC4BG063860.3  90 RWPRQETLALLKIRSEMDAAFREAALKGPLWEQVSRRLAEMGHTRSAKKCREKFENVDKYYRRTKDGRTGR--GDGKTYRFFTELEA 174
                       8********************************************************************97..77778******985 PP
2trihelix107.87.1e-34481566187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW+k ev+aLi++r+eme+r+++++ k+plWe++s  mr+ g++rs+k+Ckekwen+nk++kk+ke+++kr +e+s+tcpyf+ql+a
  TRIDC4BG063860.3 481 RWPKAEVHALIQLRTEMETRYQDTAPKGPLWEDISVGMRRLGYNRSSKRCKEKWENINKYFKKVKESSRKR-PEDSKTCPYFHQLDA 566
                       8*********************************************************************8.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 666 aa     Download sequence    
MQQPADMPPF SPPGWRGPAG APSPISSRPP APAPAPAPAP GQQHQQHQQQ HQQMDEQHGG  60
AAVSGSGSGS VDGGEEGERG GSSSAAGGNR WPRQETLALL KIRSEMDAAF REAALKGPLW  120
EQVSRRLAEM GHTRSAKKCR EKFENVDKYY RRTKDGRTGR GDGKTYRFFT ELEALHGSSA  180
AHHPPPAHVA VAPPSAPAAS TIGAYSGVPS APSRVLQAEP SPPPLLLTHQ PVSTEAAACL  240
TTTAAAAVGD ASFSDGSDGE DTDETADGGK RKRRGGSGSG SWGHGGKAMR FFEGLMRQVM  300
ERQEAMQSRL LEAIERRDQD RMIREEAWRR QEVARLAREQ DALAQERAVA ASRDAAVVSF  360
IQRITGQIVP VHAPPSSFPA KPAATVNSVK PPALQPTPVA SAAPAPPTPR PPVQAQPNVT  420
TPMRTQPQTP PPQPQQHATP TATEPQPVTP QPQHLQSKEI VVVHAAEQPP VDMAGGASPS  480
RWPKAEVHAL IQLRTEMETR YQDTAPKGPL WEDISVGMRR LGYNRSSKRC KEKWENINKY  540
FKKVKESSRK RPEDSKTCPY FHQLDALYRT KALASSSSSS PVVHAPVTVL SPVPLSSQTP  600
PPAAQHVEHG AKSSITNGNG HGNGNGAAMQ VKASNGAGAA AMFPSPVHAA GNGGNNGTAT  660
NKLVRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-48Trihelix family protein