PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG063860.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 374aa MW: 39855.4 Da PI: 9.1533

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG063860.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94	1.5e-29	74	158	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+em+ ++r+++lk+plWe+vs++++e g +rs+k+C+ek+en+ k+y+++k+g+ +r ++ +t+++f++lea TRIDC4BG063860.2 74 RWPRQETLALLKIRSEMDAAFREAALKGPLWEQVSRRLAEMGHTRSAKKCREKFENVDKYYRRTKDGRTGR--GDGKTYRFFTELEA 158 8******************************************************************97..77778****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
AMQQPADMPP FSPPGWRGPA GAPSPISSRP PAPQHQQMDE QHGGAAVSGS GSGSVDGGEE 60 GERGGSSSAA GGNRWPRQET LALLKIRSEM DAAFREAALK GPLWEQVSRR LAEMGHTRSA 120 KKCREKFENV DKYYRRTKDG RTGRGDGKTY RFFTELEALH GSSAAHHPPP AHVAVAPPSA 180 EPSPPPLLLT HQPVSTEAAA CLTTTAAAAV GDASFSDGSD GEDTDETADG GKRKRRGGSG 240 SGSWGHGGKA MRFFEGLMRQ VMERQEAMQS RLLEAIERRD QDRMIREEAW RRQEVARLAR 300 EQDALAQERA VAASRDAAVV SFIQRITGQI VPVHAPPSSF PAKPAATVNS VKPPALQPTP 360 VASAAPAPPT PHSQ

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

AMQQPADMPP FSPPGWRGPA GAPSPISSRP PAPQHQQMDE QHGGAAVSGS GSGSVDGGEE  60
GERGGSSSAA GGNRWPRQET LALLKIRSEM DAAFREAALK GPLWEQVSRR LAEMGHTRSA  120
KKCREKFENV DKYYRRTKDG RTGRGDGKTY RFFTELEALH GSSAAHHPPP AHVAVAPPSA  180
EPSPPPLLLT HQPVSTEAAA CLTTTAAAAV GDASFSDGSD GEDTDETADG GKRKRRGGSG  240
SGSWGHGGKA MRFFEGLMRQ VMERQEAMQS RLLEAIERRD QDRMIREEAW RRQEVARLAR  300
EQDALAQERA VAASRDAAVV SFIQRITGQI VPVHAPPSSF PAKPAATVNS VKPPALQPTP  360
VASAAPAPPT PHSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	9e-26	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG063860.2