PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG063830.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 226aa MW: 25621.9 Da PI: 4.2527

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG063830.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.3	5.6e-08	179	207	3	30
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 3 rahnerErrRRdriNsafeeLrellPk.a 30 ++h ErrRR+++N+ f L++l+P+ + TRIDC4BG063830.1 179 KTHVLSERRRREKLNEMFLVLKSLVPSiN 207 58999*********************844 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MVNGIGTSFW ELPFQACLES EAPSSSPSTN ETRNRDVEII VFEDLDDNIA KGFISELGEV 60 ESMSDANINC VTEEVDDFYG LIEELDVCAL EDNWVIERSF EFMSSLEMAP NMEAPRIDDN 120 TVTLSSSVNG SRPSCFTVWK RSSDWEDMDV RDPGESQKLL KKVVAGGDWT MRAQESNIKT 180 HVLSERRRRE KLNEMFLVLK SLVPSINKVV LFSIHCFLAN CRKCFP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	190	ERRRRE
2	186	191	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	3e-11	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG063830.1