PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG062730.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 807aa    MW: 88355.9 Da    PI: 5.4571
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG062730.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox48.71.2e-15152956
                      HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
          Homeobox  9 keqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                      +eq+++Le++++ +++p+ ++r++L +++    +++ rq+kvWFqNrR ++k
  TRIDC4BG062730.3  1 PEQVDTLERVYADCPKPTSSRRQQLLRECpilaNIEARQIKVWFQNRRCRDK 52
                      69***********************************************998 PP
2START154.49.1e-491333402204
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++++ve+l d++  W +++++ e+  v+  +  g+++
  TRIDC4BG062730.3 133 IAEETLTEFLSKATGTAIEWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRP-SWFRDCRSLEVFTVLPGAngGTIE 224
                       789*******************************************************9999988888.***************98788**** PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l +++l+a+++lvp Rdf+++Ry+   ++g++v++++S++     p+    +++vRae+lpSg+l++p+++g+s v++v+h + +++ ++++l
  TRIDC4BG062730.3 225 LVYTQLYAPTTLVPaRDFWTLRYTTIVEDGSLVVCERSLSGSGGGPSaasAQQFVRAEMLPSGYLVRPCDGGGSIVHIVDHLEFEAWNIPEVL 317
                       ****************************************9999999898899**************************************** PP

                       HHHHHHHHHHHHHHHHHHTXXXX CS
             START 182 rslvksglaegaktwvatlqrqc 204
                       r+l++s+++ ++k+++a+l++ +
  TRIDC4BG062730.3 318 RPLYESSRVVAQKMTTAALRHIR 340
                       *******************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 807 aa     Download sequence    
PEQVDTLERV YADCPKPTSS RRQQLLRECP ILANIEARQI KVWFQNRRCR DKLRKESSRL  60
ESVNRKVSAM NKLLMEENER LQKQVSQLVH ENAQVRQQLQ NTSVANDASC ESNVTTPQNP  120
IRDASNPSGL LSIAEETLTE FLSKATGTAI EWVQMPGMKP GPDSVGIVAI SHGCRGVAAR  180
ACGLVNLEPT KVVEILKDRP SWFRDCRSLE VFTVLPGANG GTIELVYTQL YAPTTLVPAR  240
DFWTLRYTTI VEDGSLVVCE RSLSGSGGGP SAASAQQFVR AEMLPSGYLV RPCDGGGSIV  300
HIVDHLEFEA WNIPEVLRPL YESSRVVAQK MTTAALRHIR QIAQETSGEV VYALGRQPAV  360
LRTFSQRLSR GFNDAISGFN DDGWSIMAGD GIEDVVVACN STKKIRNVSN GVNAFEAPGG  420
TICAKASMLL QSVPPAILVR FLREHRSEWA DYSMDAYLAS ALKTSTCPFP GLRPMRFSGS  480
QIIMPLAHTV ENEEILEVVR LEGQPLSHDE VLLSRDIDML QLCTGIDEKS VGSSFQLVFA  540
PIDDFPDDAP LISSGFRVIP LDMKTDVVSS GRTLDLASSL EVGSTAAQAS GASPDDCNVR  600
SVLTIAFQFP YELHLQDSVA AMARQYVRSI VSAVQRVSIA ISPSQSGINA GQRILSGLPE  660
AATLARWICQ SYHYHLGVEL LAQSDVAGEA LLKMLWHYQD AILCCSFKEV PVFTFANKAG  720
LDMLETSLVA LQDLTLDKIF DEPGRKALFT EISKLVEEGG HVYLPSGVCM SGMGRHVSFD  780
QAVAWKVLGE DSGVHCLALC FVNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein