PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG059270.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 188aa    MW: 19515.8 Da    PI: 4.7936
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG059270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2521.7e-162474156
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      + y+G+r +   g+Wv+eIr+p   gk  r++lg++ t+e+Aa+a++aa+++l+g+
  TRIDC4BG059270.1 24 PVYRGIRLR--GGKWVSEIREP---GKASRIWLGTYRTPEMAAAAYDAAALALRGA 74
                      68****976..5*********8...545*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MEEEREEAGV ALTGRRARAD TRHPVYRGIR LRGGKWVSEI REPGKASRIW LGTYRTPEMA  60
AAAYDAAALA LRGARAAGPA LNFPGEALSR PAPASCAPDD IRAAAAAAAA MVVDAGSSPR  120
TEADGGRSGS GSCGAGEQGP VVDEDDVFEM PRLLASMAEG LMMSPPRLGA ATAVDDDHDG  180
GMSLWEHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-27ERF family protein