PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG058890.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 103aa    MW: 11762.7 Da    PI: 11.6895
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG058890.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF671.9e-211968251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rie+ + rqv fskRr g++KKA+E   L daeva+++fs+ g+lyey+s
  TRIDC4BG058890.2 19 RIEDRTSRQVRFSKRRLGLFKKAFEFGLLYDAEVALLVFSPAGRLYEYAS 68
                      8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
QPEEARRGMV RRGPVELRRI EDRTSRQVRF SKRRLGLFKK AFEFGLLYDA EVALLVFSPA  60
GRLYEYASSS QSLPKSISNR HPKTAPHAKI RVILGAGQLQ QKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.12e-25MIKC_MADS family protein