PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG058280.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TALE | ||||||||
Protein Properties | Length: 238aa MW: 27379.1 Da PI: 6.6822 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 24.2 | 5.8e-08 | 188 | 221 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + TRIDC4BG058280.1 188 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 221 579*****************************87 PP | |||||||
2 | ELK | 28.2 | 4.4e-10 | 142 | 163 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++g++++E++ TRIDC4BG058280.1 142 ELKIELKQGFKSRIGDVREEIL 163 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
PIDHLPLIDA QLAQSSGLLH SYAAHHRPFL SPHDKQELDS FLAQYLMLLC SFREQLQQHV 60 RVHAVEAVMA CREIEQSLQD LTGASLEEGT GATMSEDEDE GPPMIMEAAP MDMSSNGHDM 120 MGFGPLVPTD TERSLMERVR QELKIELKQG FKSRIGDVRE EILRKRRAGK LPGDTTTILK 180 QWWQEHAKWP YPTEDDKAKL VEETGLQLKQ INNWFINQRK RNWHNNSQTS TLKSKRKR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 219 | 238 | RKRNWHNNSQTSTLKSKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62990.1 | 1e-130 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG058280.1 |