PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG054710.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 665aa MW: 73787.5 Da PI: 6.7161

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG054710.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	87.2	1.4e-27	351	401	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l+k+F++++k+AAk+Lgvc+T+LKriCR++GI+RWP+Rkik++ TRIDC4BG054710.7 351 EKTVSLQELRKHFAGSLKEAAKNLGVCPTTLKRICRHHGIDRWPSRKIKKV 401 689**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MIPLCSKTTS VKILQEVDLR GSDVSSDPRA QVIDASHRAI VPELVHVLRA VCETHKLPLA 60 QTWIPCVCQA KRASRHSDEK YKYCVSTVDE ACYVRDAAMT GFHQACSEHH LFRGEGVVGT 120 ALGTNEPCFC PDITAYSKVQ YPLSHYAKLF GLRAAVAIRL RSVKTGSMDL ILEFFLPSNC 180 INSEEQGSML NSLSNTIQQA SCTLRVVGVK ELANDGSPES SSPTPPEVCD KPAEILDELH 240 TSGINIPART RSVDASEEVS SWIASLVDVQ NSGAQGETDC GLPFGLRKQE DEGFSVTAGW 300 PTSPVLVPED KSFFPGFTKH EEYEVKGSPF SSDRSLSNSD KVIEKRRTKI EKTVSLQELR 360 KHFAGSLKEA AKNLGVCPTT LKRICRHHGI DRWPSRKIKK VGHSLKKLQM VIDSVHGAEG 420 TVRLSSLYEN FTKTTWSERE LQGDLSYPAS EQKVQLEPSV PDRQCESRFS PHTSGSNSLS 480 PTYSQSSNSS LGCSSEPKPQ QQQSSAPQLA VKQEFFMEEN QSSTQMKAAS HDELRLFTEE 540 KPVTLCRSQS HMLFSEHKPM ANMSGMQEAK PDSLKIKAMY GEERCIFRLQ PSWGFEKLKE 600 EIAKRFGISQ EVYDLKYLDD ESEWVLLTCD ADLLECIDVY KSSSAKTVRI SVNPAVQPIL 660 RGSFG

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MIPLCSKTTS VKILQEVDLR GSDVSSDPRA QVIDASHRAI VPELVHVLRA VCETHKLPLA  60
QTWIPCVCQA KRASRHSDEK YKYCVSTVDE ACYVRDAAMT GFHQACSEHH LFRGEGVVGT  120
ALGTNEPCFC PDITAYSKVQ YPLSHYAKLF GLRAAVAIRL RSVKTGSMDL ILEFFLPSNC  180
INSEEQGSML NSLSNTIQQA SCTLRVVGVK ELANDGSPES SSPTPPEVCD KPAEILDELH  240
TSGINIPART RSVDASEEVS SWIASLVDVQ NSGAQGETDC GLPFGLRKQE DEGFSVTAGW  300
PTSPVLVPED KSFFPGFTKH EEYEVKGSPF SSDRSLSNSD KVIEKRRTKI EKTVSLQELR  360
KHFAGSLKEA AKNLGVCPTT LKRICRHHGI DRWPSRKIKK VGHSLKKLQM VIDSVHGAEG  420
TVRLSSLYEN FTKTTWSERE LQGDLSYPAS EQKVQLEPSV PDRQCESRFS PHTSGSNSLS  480
PTYSQSSNSS LGCSSEPKPQ QQQSSAPQLA VKQEFFMEEN QSSTQMKAAS HDELRLFTEE  540
KPVTLCRSQS HMLFSEHKPM ANMSGMQEAK PDSLKIKAMY GEERCIFRLQ PSWGFEKLKE  600
EIAKRFGISQ EVYDLKYLDD ESEWVLLTCD ADLLECIDVY KSSSAKTVRI SVNPAVQPIL  660
RGSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	1e-138	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG054710.7