PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG053390.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 244aa MW: 25383.1 Da PI: 6.4208

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG053390.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	125.7	2.3e-39	9	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkCa++Cv+apyf++eq +++fa++hk+FGasnv+kll++lp ++r +a+ ++ yeA+ar+rdPvyG+v++i++lqqq+++l+a TRIDC4BG053390.2 9 PCGACKFLRRKCARGCVFAPYFCHEQgAAHFAAIHKVFGASNVSKLLAHLPISDRAEAAVTVSYEAQARLRDPVYGCVAHIFALQQQVMTLQA 101 7***********************89************************************************************* PP DUF260 93 elallkee 100 +la+lk++ TRIDC4BG053390.2 102 QLASLKAH 109 *99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MSMTGLGSPC GACKFLRRKC ARGCVFAPYF CHEQGAAHFA AIHKVFGASN VSKLLAHLPI 60 SDRAEAAVTV SYEAQARLRD PVYGCVAHIF ALQQQVMTLQ AQLASLKAHA PPAPQGVQHQ 120 NDVKGYVGGG AADQYAHGGY QWPNGNGVGA AAAQQQCAYG GNGGAAAGHD SISALLAGSA 180 ASDYMMYHAL EQSASDDDGH AAAAGFEAAD QSSFGTEESG WRSSSGYQDC EDLQSVAYAY 240 LNRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	2e-61	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG053390.2