PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG053380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 169aa MW: 18195.9 Da PI: 11.2599 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 123.1 | 1.4e-38 | 18 | 118 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrr+Ca++Cv+apyf+ae+ +++fa++hk+FGasn kll+++ + +r++a+++++yeA+ar+rdPvyG+v++i++lqqq+ l+a TRIDC4BG053380.1 18 PCGACKFLRRRCAAECVFAPYFCAEDgASQFAAIHKVFGASNAAKLLQQVAPGDRSEAAATVTYEAQARLRDPVYGCVAHIFALQQQVVALQA 110 7***********************9989***************************************************************** PP DUF260 93 elallkee 100 ++a+++++ TRIDC4BG053380.1 111 QVAHARTQ 118 ***99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
ISTTATMAGA GVTTTGSPCG ACKFLRRRCA AECVFAPYFC AEDGASQFAA IHKVFGASNA 60 AKLLQQVAPG DRSEAAATVT YEAQARLRDP VYGCVAHIFA LQQQVVALQA QVAHARTQAQ 120 LGAATAMHPL LQQQLQQQAW QRRPPALRRV LAARRRDVLR LRRAGGRQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58190.1 | 5e-43 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG053380.1 |