PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG052950.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 261aa MW: 28187.5 Da PI: 7.9064 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.5 | 2.6e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+teEd +l + v+++G g+W+ I+r g R++k+c++rw++yl TRIDC4BG052950.2 14 RGPWSTEEDAKLMNHVAKHGLGRWSDIPRLAGIERCGKSCRLRWLNYL 61 89******************************66************97 PP | |||||||
2 | Myb_DNA-binding | 37.7 | 4.8e-12 | 71 | 109 | 5 | 45 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++eE++l+++++ G+ W++Ia++++ gRt++ +k++w+ TRIDC4BG052950.2 71 SQEEEDLIIQLHSIIGNS-WTLIAACLP-GRTDNGVKNFWN 109 89**************99.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MSKAPRGPRK AVRRGPWSTE EDAKLMNHVA KHGLGRWSDI PRLAGIERCG KSCRLRWLNY 60 LRPDLKRAAL SQEEEDLIIQ LHSIIGNSWT LIAACLPGRT DNGVKNFWNA SIKHKLRRRG 120 IDPDTHEPMV DEGRRNGDAQ HILPSHLAAG SNTCSHGAVP LPDSITRYMG TDPLQLQHGV 180 VLVQPVVSSS STVGSDPSSS GSDTGEQCNN GADSGSQLFD LTASSTTTTE SGGQHEPHLL 240 PSPAGWSCSA STLTGSVSYW L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G57560.1 | 6e-58 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG052950.2 |