PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG052240.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1132aa MW: 126260 Da PI: 6.6041

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG052240.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.3	8.2e-55	85	201	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een +f TRIDC4BG052240.6 85 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENINF 177 5559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+yw+Lee++ +ivlvhylevk TRIDC4BG052240.6 178 QRRSYWMLEEDYMHIVLVHYLEVK 201 *******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1132 aa Download sequence
RLICRLKYPS PPPDPQQPVS PPHGIPQNPT AEFARRGSPG EGSPRRPARG SRSRRRCLVS 60 RAAPQMAEGR RYGIAPQLDM EQILKEAQTR WLRPTEICEI LKNYRNFRIA PEPPNMPASG 120 SLFLFDRKVL RFFRKDGHNW RKKKDGKTVK EAHERLKSGS IDVLHCYYAH GEENINFQRR 180 SYWMLEEDYM HIVLVHYLEV KAGKSSSRTR GHDNMLQGAY VDSPLSHLPS QSTDGESSLS 240 GRASEYEAES ADIYSGGAGY HSISRMQQHE NGGGSIIDAS VVSSYSPASS VGNHQGLRAT 300 SPNTGFYSHY QDNSPVIHNE STLGITFNGP STQFDLSSWN EMTKLNKGIH QLPPYQSHVP 360 SEQPPFTEGP GIESFSFDEV YSNGLDIKDG GHADTDREAL WQLPSANDGT TTEFLQLPSA 420 IDGRTTEFQL PSATDSTFAT VDSFEQNNKL LEEAINFPVL KTQSSNLSDI LKDSFKKSDS 480 FTRWMSKELA EVDDSQVKSS SGLYWNSEDA DNIIGASSRD QLDQFTLDPM VAQDQLFSIT 540 EYFPSWTYAG SKTRVLVTGR FLTSDEVIKL KWSCMFGEVE VPADILADGT LRCYSPSHKP 600 GRVPFYVTCS NRLACSEVRE FEYRPSDSQY MDAPSPHGAT NKIYLQARLD ELLSLGQDEQ 660 DEFQAALSNP TKELIDLNKK ITSLMTNNDQ WSELLKFADD NQLAPDDRQD QFVESGMKEK 720 LHIWLLRKAG GGGKGPSVLD DEGQGVLHLA AALGYDWAIR PTITAGVSIN FRDVHGWTAL 780 HWAAFCGRER TVVALIALGA APGALTDPRP DFPSGRTPAD LASFNGHKGI SGFLAEFSLT 840 SHLQTLNLKE AMGSNASEVS GLPGIGDVTG RIASPSAGQG LQAGSMGDSL GAVRNAAQAA 900 ARIYQVFRVQ SFQRKQAVQY EDDNGVISDE RAMSLLSYKP SKPGQFGPMH AAATRIQNKF 960 RGWKGRKEFL LIRQRIVKIQ AHVRGHQVRK HYRKIIWSVG IVEKVILRWR RRGAGLRGFR 1020 STEGATDSST RSSSVDVTPV KPAEDDYNFL QEGRKQTEER LQRALARVKS MVQYPEARDQ 1080 YQRILTVVTK MQESQPVEES MLEESTEMDE GFLMSEFKEL WDDDMPPLPG YF

Sequence ? help Back to Top

Protein Sequence Length: 1132 aa Download sequence

RLICRLKYPS PPPDPQQPVS PPHGIPQNPT AEFARRGSPG EGSPRRPARG SRSRRRCLVS  60
RAAPQMAEGR RYGIAPQLDM EQILKEAQTR WLRPTEICEI LKNYRNFRIA PEPPNMPASG  120
SLFLFDRKVL RFFRKDGHNW RKKKDGKTVK EAHERLKSGS IDVLHCYYAH GEENINFQRR  180
SYWMLEEDYM HIVLVHYLEV KAGKSSSRTR GHDNMLQGAY VDSPLSHLPS QSTDGESSLS  240
GRASEYEAES ADIYSGGAGY HSISRMQQHE NGGGSIIDAS VVSSYSPASS VGNHQGLRAT  300
SPNTGFYSHY QDNSPVIHNE STLGITFNGP STQFDLSSWN EMTKLNKGIH QLPPYQSHVP  360
SEQPPFTEGP GIESFSFDEV YSNGLDIKDG GHADTDREAL WQLPSANDGT TTEFLQLPSA  420
IDGRTTEFQL PSATDSTFAT VDSFEQNNKL LEEAINFPVL KTQSSNLSDI LKDSFKKSDS  480
FTRWMSKELA EVDDSQVKSS SGLYWNSEDA DNIIGASSRD QLDQFTLDPM VAQDQLFSIT  540
EYFPSWTYAG SKTRVLVTGR FLTSDEVIKL KWSCMFGEVE VPADILADGT LRCYSPSHKP  600
GRVPFYVTCS NRLACSEVRE FEYRPSDSQY MDAPSPHGAT NKIYLQARLD ELLSLGQDEQ  660
DEFQAALSNP TKELIDLNKK ITSLMTNNDQ WSELLKFADD NQLAPDDRQD QFVESGMKEK  720
LHIWLLRKAG GGGKGPSVLD DEGQGVLHLA AALGYDWAIR PTITAGVSIN FRDVHGWTAL  780
HWAAFCGRER TVVALIALGA APGALTDPRP DFPSGRTPAD LASFNGHKGI SGFLAEFSLT  840
SHLQTLNLKE AMGSNASEVS GLPGIGDVTG RIASPSAGQG LQAGSMGDSL GAVRNAAQAA  900
ARIYQVFRVQ SFQRKQAVQY EDDNGVISDE RAMSLLSYKP SKPGQFGPMH AAATRIQNKF  960
RGWKGRKEFL LIRQRIVKIQ AHVRGHQVRK HYRKIIWSVG IVEKVILRWR RRGAGLRGFR  1020
STEGATDSST RSSSVDVTPV KPAEDDYNFL QEGRKQTEER LQRALARVKS MVQYPEARDQ  1080
YQRILTVVTK MQESQPVEES MLEESTEMDE GFLMSEFKEL WDDDMPPLPG YF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG052240.6