PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG052240.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1052aa MW: 117522 Da PI: 6.1072

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG052240.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.4	7.5e-55	19	135	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een +f TRIDC4BG052240.5 19 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENINF 111 5559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+yw+Lee++ +ivlvhylevk TRIDC4BG052240.5 112 QRRSYWMLEEDYMHIVLVHYLEVK 135 *******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1052 aa Download sequence
AEGRRYGIAP QLDMEQILKE AQTRWLRPTE ICEILKNYRN FRIAPEPPNM PASGSLFLFD 60 RKVLRFFRKD GHNWRKKKDG KTVKEAHERL KSGSIDVLHC YYAHGEENIN FQRRSYWMLE 120 EDYMHIVLVH YLEVKAGKSS SRTRGHDNML QGAYVDSPLS HLPSQSTDGE SSLSGRASEY 180 EAESADIYSG GAGYHSISRM QQHENGGGSI IDASVVSSYS PASSVGNHQG LRATSPNTGF 240 YSHYQDNSPV IHNESTLGIT FNGPSTQFDL SSWNEMTKLN KGIHQLPPYQ SHVPSEQPPF 300 TEGPGIESFS FDEVYSNGLD IKDGGHADTD REALWQLPSA IDGRTTEFQL PSATDSTFAT 360 VDSFEQNNKL LEEAINFPVL KTQSSNLSDI LKDSFKKSDS FTRWMSKELA EVDDSQVKSS 420 SGLYWNSEDA DNIIGASSRD QLDQFTLDPM VAQDQLFSIT EYFPSWTYAG SKTRVLVTGR 480 FLTSDEVIKL KWSCMFGEVE VPADILADGT LRCYSPSHKP GRVPFYVTCS NRLACSEVRE 540 FEYRPSDSQY MDAPSPHGAT NKIYLQARLD ELLSLGQDEQ DEFQAALSNP TKELIDLNKK 600 ITSLMTNNDQ WSELLKFADD NQLAPDDRQD QFVESGMKEK LHIWLLRKAG GGGKGPSVLD 660 DEGQGVLHLA AALGYDWAIR PTITAGVSIN FRDVHGWTAL HWAAFCGRER TVVALIALGA 720 APGALTDPRP DFPSGRTPAD LASFNGHKGI SGFLAEFSLT SHLQTLNLKE AMGSNASEVS 780 GLPGIGDVTG RIASPSAGQG LQAGSMGDSL GAVRNAAQAA ARIYQVFRVQ SFQRKQAVQY 840 EDDNGVISDE RAMSLLSYKP SKPGQFGPMH AAATRIQNKF RGWKGRKEFL LIRQRIVKIQ 900 AHVRGHQVRK HYRKIIWSVG IVEKVILRWR RRGAGLRGFR STEGATDSST RSSSVDVTPV 960 KPAEDDYNFL QEGRKQTEER LQRALARVKS MVQYPEARDQ YQRILTVVTK MQESQPVEES 1020 MLEESTEMDE GFLMSEFKEL WDDDMPPLPG YF

Sequence ? help Back to Top

Protein Sequence Length: 1052 aa Download sequence

AEGRRYGIAP QLDMEQILKE AQTRWLRPTE ICEILKNYRN FRIAPEPPNM PASGSLFLFD  60
RKVLRFFRKD GHNWRKKKDG KTVKEAHERL KSGSIDVLHC YYAHGEENIN FQRRSYWMLE  120
EDYMHIVLVH YLEVKAGKSS SRTRGHDNML QGAYVDSPLS HLPSQSTDGE SSLSGRASEY  180
EAESADIYSG GAGYHSISRM QQHENGGGSI IDASVVSSYS PASSVGNHQG LRATSPNTGF  240
YSHYQDNSPV IHNESTLGIT FNGPSTQFDL SSWNEMTKLN KGIHQLPPYQ SHVPSEQPPF  300
TEGPGIESFS FDEVYSNGLD IKDGGHADTD REALWQLPSA IDGRTTEFQL PSATDSTFAT  360
VDSFEQNNKL LEEAINFPVL KTQSSNLSDI LKDSFKKSDS FTRWMSKELA EVDDSQVKSS  420
SGLYWNSEDA DNIIGASSRD QLDQFTLDPM VAQDQLFSIT EYFPSWTYAG SKTRVLVTGR  480
FLTSDEVIKL KWSCMFGEVE VPADILADGT LRCYSPSHKP GRVPFYVTCS NRLACSEVRE  540
FEYRPSDSQY MDAPSPHGAT NKIYLQARLD ELLSLGQDEQ DEFQAALSNP TKELIDLNKK  600
ITSLMTNNDQ WSELLKFADD NQLAPDDRQD QFVESGMKEK LHIWLLRKAG GGGKGPSVLD  660
DEGQGVLHLA AALGYDWAIR PTITAGVSIN FRDVHGWTAL HWAAFCGRER TVVALIALGA  720
APGALTDPRP DFPSGRTPAD LASFNGHKGI SGFLAEFSLT SHLQTLNLKE AMGSNASEVS  780
GLPGIGDVTG RIASPSAGQG LQAGSMGDSL GAVRNAAQAA ARIYQVFRVQ SFQRKQAVQY  840
EDDNGVISDE RAMSLLSYKP SKPGQFGPMH AAATRIQNKF RGWKGRKEFL LIRQRIVKIQ  900
AHVRGHQVRK HYRKIIWSVG IVEKVILRWR RRGAGLRGFR STEGATDSST RSSSVDVTPV  960
KPAEDDYNFL QEGRKQTEER LQRALARVKS MVQYPEARDQ YQRILTVVTK MQESQPVEES  1020
MLEESTEMDE GFLMSEFKEL WDDDMPPLPG YF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG052240.5