PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG052240.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1059aa MW: 118006 Da PI: 5.9455

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG052240.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	137.7	3.7e-43	45	128	35	118
CG-1 35 ksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 gsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een +fqrr+yw+Lee++ +ivlvhylevk TRIDC4BG052240.3 45 VGGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENINFQRRSYWMLEEDYMHIVLVHYLEVK 128 579******************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1059 aa Download sequence
QACNDTCYLE PIYYESKHAH ELTKCLQVVM LRSNCISLTF VSLVVGGSLF LFDRKVLRFF 60 RKDGHNWRKK KDGKTVKEAH ERLKSGSIDV LHCYYAHGEE NINFQRRSYW MLEEDYMHIV 120 LVHYLEVKAG KSSSRTRGHD NMLQGAYVDS PLSHLPSQST DGESSLSGRA SEYEAESADI 180 YSGGAGYHSI SRMQQHENGG GSIIDASVVS SYSPASSVGN HQGLRATSPN TGFYSHYQDN 240 SPVIHNESTL GITFNGPSTQ FDLSSWNEMT KLNKGIHQLP PYQSHVPSEQ PPFTEGPGIE 300 SFSFDEVYSN GLDIKDGGHA DTDREALWQL PSANDGTTTE FLQLPSAIDG RTTEFQLPSA 360 TDSTFATVDS FEQNNKLLEE AINFPVLKTQ SSNLSDILKD SFKKSDSFTR WMSKELAEVD 420 DSQVKSSSGL YWNSEDADNI IGASSRDQLD QFTLDPMVAQ DQLFSITEYF PSWTYAGSKT 480 RVLVTGRFLT SDEVIKLKWS CMFGEVEVPA DILADGTLRC YSPSHKPGRV PFYVTCSNRL 540 ACSEVREFEY RPSDSQYMDA PSPHGATNKI YLQARLDELL SLGQDEQDEF QAALSNPTKE 600 LIDLNKKITS LMTNNDQWSE LLKFADDNQL APDDRQDQFV ESGMKEKLHI WLLRKAGGGG 660 KGPSVLDDEG QGVLHLAAAL GYDWAIRPTI TAGVSINFRD VHGWTALHWA AFCGRERTVV 720 ALIALGAAPG ALTDPRPDFP SGRTPADLAS FNGHKGISGF LAEFSLTSHL QTLNLKEAMG 780 SNASEVSGLP GIGDVTGRIA SPSAGQGLQA GSMGDSLGAV RNAAQAAARI YQVFRVQSFQ 840 RKQAVQYEDD NGVISDERAM SLLSYKPSKP GQFGPMHAAA TRIQNKFRGW KGRKEFLLIR 900 QRIVKIQAHV RGHQVRKHYR KIIWSVGIVE KVILRWRRRG AGLRGFRSTE GATDSSTRSS 960 SVDVTPVKPA EDDYNFLQEG RKQTEERLQR ALARVKSMVQ YPEARDQYQR ILTVVTKMQE 1020 SQPVEESMLE ESTEMDEGFL MSEFKELWDD DMPPLPGYF

Sequence ? help Back to Top

Protein Sequence Length: 1059 aa Download sequence

QACNDTCYLE PIYYESKHAH ELTKCLQVVM LRSNCISLTF VSLVVGGSLF LFDRKVLRFF  60
RKDGHNWRKK KDGKTVKEAH ERLKSGSIDV LHCYYAHGEE NINFQRRSYW MLEEDYMHIV  120
LVHYLEVKAG KSSSRTRGHD NMLQGAYVDS PLSHLPSQST DGESSLSGRA SEYEAESADI  180
YSGGAGYHSI SRMQQHENGG GSIIDASVVS SYSPASSVGN HQGLRATSPN TGFYSHYQDN  240
SPVIHNESTL GITFNGPSTQ FDLSSWNEMT KLNKGIHQLP PYQSHVPSEQ PPFTEGPGIE  300
SFSFDEVYSN GLDIKDGGHA DTDREALWQL PSANDGTTTE FLQLPSAIDG RTTEFQLPSA  360
TDSTFATVDS FEQNNKLLEE AINFPVLKTQ SSNLSDILKD SFKKSDSFTR WMSKELAEVD  420
DSQVKSSSGL YWNSEDADNI IGASSRDQLD QFTLDPMVAQ DQLFSITEYF PSWTYAGSKT  480
RVLVTGRFLT SDEVIKLKWS CMFGEVEVPA DILADGTLRC YSPSHKPGRV PFYVTCSNRL  540
ACSEVREFEY RPSDSQYMDA PSPHGATNKI YLQARLDELL SLGQDEQDEF QAALSNPTKE  600
LIDLNKKITS LMTNNDQWSE LLKFADDNQL APDDRQDQFV ESGMKEKLHI WLLRKAGGGG  660
KGPSVLDDEG QGVLHLAAAL GYDWAIRPTI TAGVSINFRD VHGWTALHWA AFCGRERTVV  720
ALIALGAAPG ALTDPRPDFP SGRTPADLAS FNGHKGISGF LAEFSLTSHL QTLNLKEAMG  780
SNASEVSGLP GIGDVTGRIA SPSAGQGLQA GSMGDSLGAV RNAAQAAARI YQVFRVQSFQ  840
RKQAVQYEDD NGVISDERAM SLLSYKPSKP GQFGPMHAAA TRIQNKFRGW KGRKEFLLIR  900
QRIVKIQAHV RGHQVRKHYR KIIWSVGIVE KVILRWRRRG AGLRGFRSTE GATDSSTRSS  960
SVDVTPVKPA EDDYNFLQEG RKQTEERLQR ALARVKSMVQ YPEARDQYQR ILTVVTKMQE  1020
SQPVEESMLE ESTEMDEGFL MSEFKELWDD DMPPLPGYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG052240.3