PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG052240.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1155aa MW: 128843 Da PI: 6.7413

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG052240.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.2	8.5e-55	109	225	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een +f TRIDC4BG052240.1 109 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENINF 201 5559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+yw+Lee++ +ivlvhylevk TRIDC4BG052240.1 202 QRRSYWMLEEDYMHIVLVHYLEVK 225 *******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1155 aa Download sequence
APPFLPPFLR SHRAWCPVVS LSPPRLICRL KYPSPPPDPQ QPVSPPHGIP QNPTAEFARR 60 GSPGEGSPRR PARGSRSRRR CLVSRAAPQM AEGRRYGIAP QLDMEQILKE AQTRWLRPTE 120 ICEILKNYRN FRIAPEPPNM PASGSLFLFD RKVLRFFRKD GHNWRKKKDG KTVKEAHERL 180 KSGSIDVLHC YYAHGEENIN FQRRSYWMLE EDYMHIVLVH YLEVKAGKSS SRTRGHDNML 240 QGAYVDSPLS HLPSQSTDGE SSLSGRASEY EAESDIYSGG AGYHSISRMQ QHENGGGSII 300 DASVVSSYSP ASSVGNHQGL RATSPNTGFY SHYQDNSPVI HNESTLGITF NGPSTQFDLS 360 SWNEMTKLNK GIHQLPPYQS HVPSEQPPFT EGPGIESFSF DEVYSNGLDI KDGGHADTDR 420 EALWQLPSAN DGTTTEFLQL PSAIDGRTTE FQLPSATDST FATVDSFEQN NKLLEEAINF 480 PVLKTQSSNL SDILKDSFKK SDSFTRWMSK ELAEVDDSQV KSSSGLYWNS EDADNIIGAS 540 SRDQLDQFTL DPMVAQDQLF SITEYFPSWT YAGSKTRVLV TGRFLTSDEV IKLKWSCMFG 600 EVEVPADILA DGTLRCYSPS HKPGRVPFYV TCSNRLACSE VREFEYRPSD SQYMDAPSPH 660 GATNKIYLQA RLDELLSLGQ DEQDEFQAAL SNPTKELIDL NKKITSLMTN NDQWSELLKF 720 ADDNQLAPDD RQDQFVESGM KEKLHIWLLR KAGGGGKGPS VLDDEGQGVL HLAAALGYDW 780 AIRPTITAGV SINFRDVHGW TALHWAAFCG RERTVVALIA LGAAPGALTD PRPDFPSGRT 840 PADLASFNGH KGISGFLAEF SLTSHLQTLN LKEAMGSNAS EVSGLPGIGD VTGRIASPSA 900 GQGLQAGSMG DSLGAVRNAA QAAARIYQVF RVQSFQRKQA VQYEDDNGVI SDERAMSLLS 960 YKPSKPGQFG PMHAAATRIQ NKFRGWKGRK EFLLIRQRIV KIQAHVRGHQ VRKHYRKIIW 1020 SVGIVEKVIL RWRRRGAGLR GFRSTEGATD SSTRSSSVDV TPVKPAEDDY NFLQEGRKQT 1080 EERLQRALAR VKSMVQYPEA RDQYQRILTV VTKMQESQPV EESMLEESTE MDEGFLMSEF 1140 KELWDDDMPP LPGYF

Sequence ? help Back to Top

Protein Sequence Length: 1155 aa Download sequence

APPFLPPFLR SHRAWCPVVS LSPPRLICRL KYPSPPPDPQ QPVSPPHGIP QNPTAEFARR  60
GSPGEGSPRR PARGSRSRRR CLVSRAAPQM AEGRRYGIAP QLDMEQILKE AQTRWLRPTE  120
ICEILKNYRN FRIAPEPPNM PASGSLFLFD RKVLRFFRKD GHNWRKKKDG KTVKEAHERL  180
KSGSIDVLHC YYAHGEENIN FQRRSYWMLE EDYMHIVLVH YLEVKAGKSS SRTRGHDNML  240
QGAYVDSPLS HLPSQSTDGE SSLSGRASEY EAESDIYSGG AGYHSISRMQ QHENGGGSII  300
DASVVSSYSP ASSVGNHQGL RATSPNTGFY SHYQDNSPVI HNESTLGITF NGPSTQFDLS  360
SWNEMTKLNK GIHQLPPYQS HVPSEQPPFT EGPGIESFSF DEVYSNGLDI KDGGHADTDR  420
EALWQLPSAN DGTTTEFLQL PSAIDGRTTE FQLPSATDST FATVDSFEQN NKLLEEAINF  480
PVLKTQSSNL SDILKDSFKK SDSFTRWMSK ELAEVDDSQV KSSSGLYWNS EDADNIIGAS  540
SRDQLDQFTL DPMVAQDQLF SITEYFPSWT YAGSKTRVLV TGRFLTSDEV IKLKWSCMFG  600
EVEVPADILA DGTLRCYSPS HKPGRVPFYV TCSNRLACSE VREFEYRPSD SQYMDAPSPH  660
GATNKIYLQA RLDELLSLGQ DEQDEFQAAL SNPTKELIDL NKKITSLMTN NDQWSELLKF  720
ADDNQLAPDD RQDQFVESGM KEKLHIWLLR KAGGGGKGPS VLDDEGQGVL HLAAALGYDW  780
AIRPTITAGV SINFRDVHGW TALHWAAFCG RERTVVALIA LGAAPGALTD PRPDFPSGRT  840
PADLASFNGH KGISGFLAEF SLTSHLQTLN LKEAMGSNAS EVSGLPGIGD VTGRIASPSA  900
GQGLQAGSMG DSLGAVRNAA QAAARIYQVF RVQSFQRKQA VQYEDDNGVI SDERAMSLLS  960
YKPSKPGQFG PMHAAATRIQ NKFRGWKGRK EFLLIRQRIV KIQAHVRGHQ VRKHYRKIIW  1020
SVGIVEKVIL RWRRRGAGLR GFRSTEGATD SSTRSSSVDV TPVKPAEDDY NFLQEGRKQT  1080
EERLQRALAR VKSMVQYPEA RDQYQRILTV VTKMQESQPV EESMLEESTE MDEGFLMSEF  1140
KELWDDDMPP LPGYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG052240.1