PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG052050.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 316aa MW: 35085.8 Da PI: 4.7143 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.2 | 1.6e-19 | 64 | 115 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ eq+++Le+ Fe +++++ e+++++A+ lgL rqV vWFqNrRa++k TRIDC4BG052050.2 64 RRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 115 467789*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 128.5 | 2.7e-41 | 62 | 153 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl+ eqv++LE+sFe+++kL+perK+++ar+Lgl+prqvavWFqnrRAR+ktkqlE+d++aL++++dal+++ ++L++++++L++e++e TRIDC4BG052050.2 62 KKRRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDFNALRARHDALRADCDALRRDKDALAAEVHE 153 9**************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MKRQIKRPTR SQESPEPGEK LAFAEKEHLL AAYMEHDEPE LEEADEEEEE EERAMSCGLG 60 GKKRRLALEQ VRALERSFET DNKLDPERKA RIARDLGLHP RQVAVWFQNR RARWKTKQLE 120 RDFNALRARH DALRADCDAL RRDKDALAAE VHELREKLSI KPETAVKAEA TGNVDAAEER 180 LQQATMVGAT VCKDGSSDSD SSAVFNDEAS PYSSAVFEQQ GFMGFGASFL DSASAAAATT 240 GCSSLPMLEP KWPGAYPYDA NRSGGYGFTE EWLAGSDAIV NDGSSAFFSE EHVSNLNFGW 300 CSSGAEGFDL QSYCKK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 110 | 118 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 2e-31 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG052050.2 |