PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4BG051420.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 244aa MW: 27433.3 Da PI: 8.4588 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.8 | 1.4e-16 | 143 | 233 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f k +++s+v + +l lp +f++++ k ++ t+tl de+ +++e k+ ++++ l++GW +F+ ++ +++gD+ vF+l++ ++f + TRIDC4BG051420.1 143 FMKRMLHSHVVRGFWLGLPSHFCDTYLPK--NDCTITLVDEKDEEFESKY--LAYKKG--LSGGWAGFALDHVIRDGDSTVFQLIKPTTF--K 227 8999********************99533..4459***************..555555..9***********************986777..9 PP EEEE-S CS B3 94 vkvfrk 99 v+++r+ TRIDC4BG051420.1 228 VHIIRA 233 999885 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 244 aa Download sequence |
MAIEKKGMSA YEAERERTVE ENKRKMEALN LRHLSAAVAT YAPKTPSPMK HKRRRIIEAA 60 TPVPSPPRRS RRLAHLPEVK YADACAEVGE DSERVGRWSP RRRSGSIYLA GGGGGPISMK 120 ARMEAASKAE ELESQLDPEF PSFMKRMLHS HVVRGFWLGL PSHFCDTYLP KNDCTITLVD 180 EKDEEFESKY LAYKKGLSGG WAGFALDHVI RDGDSTVFQL IKPTTFKVHI IRAAVGDDDN 240 EEME |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 52 | 56 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G42700.1 | 2e-47 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4BG051420.1 |