PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG051230.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 293aa    MW: 31601 Da    PI: 4.5106
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG051230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.6e-1875124255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp+    +  r++lg+f +ae Aa a++ a++ ++g
  TRIDC4BG051230.1  75 QYRGVRRRP-WGKWAAEIRDPV----KgVRIWLGTFPSAEAAAHAYDDAARDFRG 124
                       69*******.**********75....44**********************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MCGGAILAEL IPSAPPRSVT AVHLLPKRPR VDDFEAAFKR FDEDSAEEEV LQRAGFEFGA  60
HRQPAARRGG SSPAQYRGVR RRPWGKWAAE IRDPVKGVRI WLGTFPSAEA AAHAYDDAAR  120
DFRGASARLN FPSSSTSAPK RHVAAKATPC LVIDLVDDEE GDAGAADAGG MSSESSGALP  180
DFSWQGMSAS DEVMAQYVHA EVESSQSVVD LASPKKRPRI EADAVLPAAS DDSANQLLDP  240
FMFDDQFGFL DSSSYEWLDS LFGADAEKID DSQLGLWSFG DDDCLARTAR ACK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.31e-23ERF family protein