PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG051160.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 294aa MW: 31754.4 Da PI: 5.2339 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.2 | 9.7e-19 | 83 | 130 | 4 | 55 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +G+r+++ +g+W+AeIrdp + +r++lg+f+ta++Aa+a++ a+++l+g TRIDC4BG051160.2 83 HGIRQRP-WGKWAAEIRDPH----KgTRVWLGTFDTADDAARAYDVAARRLRG 130 6******.**********72....35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
PKQVAAGQAS SKKGGMSKRH HSSIPDVDDF EAAFEDFDDD FDLQAEEDGG DHVVFASKPA 60 FYPAYGGGRR TVQAASMKKR VLHGIRQRPW GKWAAEIRDP HKGTRVWLGT FDTADDAARA 120 YDVAARRLRG SKAKVNFPDA ARAGARPRRA SRRTAQKPPC PPAGTTAYSA TAAARAQPEQ 180 DAMMAKPERM EFSDVDTFVD LTAAVAALPP VTASSFADKM PRVDEDSSEG SGGGAMLGFA 240 DELGFEPFMM FQYESMDSLF AGHAVIQDAR GVDGGMDGVS LWSFDEFPMD SAIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 5e-18 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG051160.2 |