PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG050990.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 622aa MW: 71316.2 Da PI: 8.1735

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG050990.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87.4	2.1e-27	13	98	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+YA ++GFsvrks+s ks ++ + +rtfvCs+eg+r+++k + ++ +r+r+etr+gC a++ +k ++ +k+++++++ +HnH+ TRIDC4BG050990.6 13 EFYNRYAGHMGFSVRKSSSDKS-ADNITRSRTFVCSREGFRKDKKGA-NEVKRPRPETRIGCPARMIIKITSYNKYHIAEFVADHNHQ 98 6******************9.555699**********9999.99***********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
VGMEFDNEDK AYEFYNRYAG HMGFSVRKSS SDKSADNITR SRTFVCSREG FRKDKKGANE 60 VKRPRPETRI GCPARMIIKI TSYNKYHIAE FVADHNHQPA PPSTMHMLRS QRVLTEVQTT 120 ECNSSEDSTT PSRFSGGSLV QQAGIFRNVN FLPADYRSSL CSKRMKNMQR GDAGGVVKYL 180 QSMQLNNPSF FYAVQLDEDD RLTNIFWADS KSRVDFSYFS DVVCLDTTYK INAHGRPLTL 240 FLGVNHHKQI SIFGAALLYD ESVESFKWLF DTFKIATDGK QPKTILTDQS IAASAAISAV 300 WPSTIHCLCP WQLYQNTVKH LNHIFQGSKT FAKDFSRCVY DYEDEEGFLL GWRTMLERYD 360 LRNNEWLHKL FKDRDKWASA YNRHVFTADI KSSLQLECVS NVLRKYLSPQ FDFLSFFKHY 420 ERVLDEHRYA ELQADFHASQ SFPRIPPSKM LKQAANIYTP VVFENFRREF EMFVDSVIYS 480 CGESGTASDY RVAVTDRPGE YYVRFESSDL SVVCSCKKFE SMGIQCCHVL KVLDFRNIKE 540 LPQKYFQRRW TKDAKSADRG NQEFLNDGAS QTPSSCLNAP APFIGQPQVH LNNLHDHATS 600 ISTSGQHALQ GNAHGNQVSN TD

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

VGMEFDNEDK AYEFYNRYAG HMGFSVRKSS SDKSADNITR SRTFVCSREG FRKDKKGANE  60
VKRPRPETRI GCPARMIIKI TSYNKYHIAE FVADHNHQPA PPSTMHMLRS QRVLTEVQTT  120
ECNSSEDSTT PSRFSGGSLV QQAGIFRNVN FLPADYRSSL CSKRMKNMQR GDAGGVVKYL  180
QSMQLNNPSF FYAVQLDEDD RLTNIFWADS KSRVDFSYFS DVVCLDTTYK INAHGRPLTL  240
FLGVNHHKQI SIFGAALLYD ESVESFKWLF DTFKIATDGK QPKTILTDQS IAASAAISAV  300
WPSTIHCLCP WQLYQNTVKH LNHIFQGSKT FAKDFSRCVY DYEDEEGFLL GWRTMLERYD  360
LRNNEWLHKL FKDRDKWASA YNRHVFTADI KSSLQLECVS NVLRKYLSPQ FDFLSFFKHY  420
ERVLDEHRYA ELQADFHASQ SFPRIPPSKM LKQAANIYTP VVFENFRREF EMFVDSVIYS  480
CGESGTASDY RVAVTDRPGE YYVRFESSDL SVVCSCKKFE SMGIQCCHVL KVLDFRNIKE  540
LPQKYFQRRW TKDAKSADRG NQEFLNDGAS QTPSSCLNAP APFIGQPQVH LNNLHDHATS  600
ISTSGQHALQ GNAHGNQVSN TD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	66	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-114	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG050990.6