PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG050990.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 601aa MW: 69251.1 Da PI: 8.1693

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG050990.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87.5	2e-27	15	100	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+YA ++GFsvrks+s ks ++ + +rtfvCs+eg+r+++k + ++ +r+r+etr+gC a++ +k ++ +k+++++++ +HnH+ TRIDC4BG050990.2 15 EFYNRYAGHMGFSVRKSSSDKS-ADNITRSRTFVCSREGFRKDKKGA-NEVKRPRPETRIGCPARMIIKITSYNKYHIAEFVADHNHQ 100 6******************9.555699**********9999.99***********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
PEVGMEFDNE DKAYEFYNRY AGHMGFSVRK SSSDKSADNI TRSRTFVCSR EGFRKDKKGA 60 NEVKRPRPET RIGCPARMII KITSYNKYHI AEFVADHNHQ PAPPSTMHML RSQRVLTEVQ 120 TTECNSSEDS TTPSRFSGGS LVQQAGIFRN VNFLPADYRS SLCSKRMKNM QRGDAGGVVK 180 YLQSMQLNNP SFFYAVQLDE DDRLTNIFWA DSKSRVDFSY FSDVVCLDTT YKINAHGRPL 240 TLFLGVNHHK QISIFGAALL YDESVESFKW LFDTFKIATD GKQPKTILTD QSIAASAAIS 300 AVWPSTIHCL CPWQLYQNTV KHLNHIFQGS KTFAKDFSRC VYDYEDEEGF LLGWRTMLER 360 YDLRNNEWLH KLFKDRDKWA SAYNRHVFTA DIKSSLQLEC VSNVLRKYLS PQFDFLSFFK 420 HYERVLDEHR YAELQADFHA SQSFPRIPPS KMLKQAANIY TPVVFENFRR EFEMFVDSVI 480 YSCGESGTAS DYRVAVTDRP GEYYVRFESS DLSVVCSCKK FESMGIQCCH VLKVLDFRNI 540 KELPQKYFQR RWTKDAKSAD RGNQEFLNDG ASQTPSSCLN APAPFIGQPQ VHLNNLHDHV 600 S

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

PEVGMEFDNE DKAYEFYNRY AGHMGFSVRK SSSDKSADNI TRSRTFVCSR EGFRKDKKGA  60
NEVKRPRPET RIGCPARMII KITSYNKYHI AEFVADHNHQ PAPPSTMHML RSQRVLTEVQ  120
TTECNSSEDS TTPSRFSGGS LVQQAGIFRN VNFLPADYRS SLCSKRMKNM QRGDAGGVVK  180
YLQSMQLNNP SFFYAVQLDE DDRLTNIFWA DSKSRVDFSY FSDVVCLDTT YKINAHGRPL  240
TLFLGVNHHK QISIFGAALL YDESVESFKW LFDTFKIATD GKQPKTILTD QSIAASAAIS  300
AVWPSTIHCL CPWQLYQNTV KHLNHIFQGS KTFAKDFSRC VYDYEDEEGF LLGWRTMLER  360
YDLRNNEWLH KLFKDRDKWA SAYNRHVFTA DIKSSLQLEC VSNVLRKYLS PQFDFLSFFK  420
HYERVLDEHR YAELQADFHA SQSFPRIPPS KMLKQAANIY TPVVFENFRR EFEMFVDSVI  480
YSCGESGTAS DYRVAVTDRP GEYYVRFESS DLSVVCSCKK FESMGIQCCH VLKVLDFRNI  540
KELPQKYFQR RWTKDAKSAD RGNQEFLNDG ASQTPSSCLN APAPFIGQPQ VHLNNLHDHV  600
S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	68	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-114	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG050990.2