PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG050220.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ERF

Protein Properties

Length: 333aa MW: 35981.3 Da PI: 10.9125

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG050220.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.3	5.2e-15	163	212	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TRIDC4BG050220.3 163 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 212 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
PTCRSLASSP GSGSRCTSQS GRRRCLHPCT PPRPSRRRRC RRRASPSLAS SRRRSGRGRR 60 SSAASPGTGG RGGTRLTCGT TPAGRKARPG KEGKFEGGYD KEEKAARAYD LAALKYWGPT 120 THINFPLSTY EKELEEMKHM TRQEFIAHLR RNSSGFSRGA SMYRGVTRHH QHGRWQARIG 180 RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGLSAVTNFD ISKYDVKRIC ASSHLIGGDL 240 ACRRSPTRDA PALPSGVSVA VERPEAGASD NSSDASDGHR GAHLLHGLQY AHAMKYEAGE 300 GSNGGGNWMP GAARPVAGVP AAHPLPVFAL WND

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	22	39	RRRCLHPCTPPRPSRRRR
2	36	54	RRRRCRRRASPSLASSRRR
3	37	55	RRRRCRRRASPSLASSRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	2e-84	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG050220.3