PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG049930.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 671aa MW: 77822.1 Da PI: 6.8701

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG049930.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.1	6.1e-18	61	146	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ leHnH+++p TRIDC4BG049930.10 61 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQFSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLEHNHPISP 146 5************9998887.7888************9998...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
EPDLTLDEVA EQNRSAPDEE DEDAFIVEEI GDSSDDRQAE PTVMLEPKKG MMFSSEDDAV 60 RFYKAYARKK GFGVIRRTTR HGEDKMLTYF TLACNRQGKA QFSAKNSFKP NPSTRMQCPA 120 KSNFSRRGEN FCITTVTLEH NHPISPSKAR FLRCHKKVDL HSKRRLELND QAGARMNTNF 180 GSPVMEAGNL EFGEKECTNY LQEKRSLKLG AGDAHALYQY FLRMQSKDPA FFHVMDVAED 240 GRLRNVFWAD ARSRAAYESY WDVITFDTTY LTNKYRIPLA TFVGVNHHGE SVLLGCGLLS 300 NEDTETFVWL FKSWLCCMSC KPPNAIVTDQ CKPMQNAIEE VFPQARHRWC TCHIMKKIPE 360 NLSGYENIKS SLSNVVYDSL TKHGFDKAWV EMINKYDLQD NEWLAGLYDN KNLWVPAYVK 420 DTFWAGMSST KRSESVNAFF DGYVNARTTL KQFVEQYENA LREKVEKENK ADSKSFQEQI 480 PCITHYDFER QFQAAYTTAK FKEFQDQLRG KIYCYPTQLN KEGSVFTFGV REDSKIFCEG 540 EDGKRKEKRV ILEFIVLFNQ GECDVQCMCR LFEFRGILCS HIISVLALME ITDVPSRYIL 600 QRWRKDIKRK HTFVRCFYDD MIDTQVVQRY DNLCKHSHEV AENGAESDAL HDLVMDGLNE 660 LQRKIDAYRA R

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

EPDLTLDEVA EQNRSAPDEE DEDAFIVEEI GDSSDDRQAE PTVMLEPKKG MMFSSEDDAV  60
RFYKAYARKK GFGVIRRTTR HGEDKMLTYF TLACNRQGKA QFSAKNSFKP NPSTRMQCPA  120
KSNFSRRGEN FCITTVTLEH NHPISPSKAR FLRCHKKVDL HSKRRLELND QAGARMNTNF  180
GSPVMEAGNL EFGEKECTNY LQEKRSLKLG AGDAHALYQY FLRMQSKDPA FFHVMDVAED  240
GRLRNVFWAD ARSRAAYESY WDVITFDTTY LTNKYRIPLA TFVGVNHHGE SVLLGCGLLS  300
NEDTETFVWL FKSWLCCMSC KPPNAIVTDQ CKPMQNAIEE VFPQARHRWC TCHIMKKIPE  360
NLSGYENIKS SLSNVVYDSL TKHGFDKAWV EMINKYDLQD NEWLAGLYDN KNLWVPAYVK  420
DTFWAGMSST KRSESVNAFF DGYVNARTTL KQFVEQYENA LREKVEKENK ADSKSFQEQI  480
PCITHYDFER QFQAAYTTAK FKEFQDQLRG KIYCYPTQLN KEGSVFTFGV REDSKIFCEG  540
EDGKRKEKRV ILEFIVLFNQ GECDVQCMCR LFEFRGILCS HIISVLALME ITDVPSRYIL  600
QRWRKDIKRK HTFVRCFYDD MIDTQVVQRY DNLCKHSHEV AENGAESDAL HDLVMDGLNE  660
LQRKIDAYRA R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-126	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG049930.10