PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG049410.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 334aa MW: 36848.1 Da PI: 6.8257

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG049410.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.6	4.2e-18	121	174	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rqV +WFqNrRa++k TRIDC4BG049410.2 121 KKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 174 4568999**********************************************9 PP
2	HD-ZIP_I/II	130.6	6.3e-42	120	210	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr++da+k+en++L +++++L++e+ TRIDC4BG049410.2 120 EKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEI 210 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
KKPMASNGMA SSPSAFFPPN FLLHMQQAPP QHDPQEHHQQ HHHHHHEHHL PPPHPQHNPF 60 LPSPQCPSLQ DFRGGLSPML GKRPAMYGGG GDGGCGGDEV TGGGANEEET SDDGSQLGGE 120 KKRRLNVEQV RTLEKNFEVA NKLEPERKMQ LARALGLQPR QVAIWFQNRR ARWKTKQLEK 180 DYDVLKRQFD AVKAENDALL SHNKKLQSEI LGLKGCREAA SELINLNKET EASCSNRSEN 240 SSEINLDISR TPPSDGPMDA PPSHQQGGGG GGMIPFYPSV ARPAGVDIDH LLHASVPKME 300 HHHGGPDTPS FGNLLCGVDE PPPFWPWADH QQFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	177	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-80	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG049410.2