PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG049410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 339aa MW: 37251.5 Da PI: 6.5818 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.6 | 4.3e-18 | 126 | 179 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rqV +WFqNrRa++k TRIDC4BG049410.1 126 KKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 179 4568999**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.5 | 6.5e-42 | 125 | 215 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr++da+k+en++L +++++L++e+ TRIDC4BG049410.1 125 EKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEI 215 69**************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MASNGMASSP SAFFPPNFLL HMQQAPPQHD PQEHHQQHHH HHHEHHLPPP HPQHNPFLPS 60 PQCPSLQDFR GDVVPTCAAG LSPMLGKRPA MYGGGGDGGC GGDEVTGGGA NEEETSDDGS 120 QLGGEKKRRL NVEQVRTLEK NFEVANKLEP ERKMQLARAL GLQPRQVAIW FQNRRARWKT 180 KQLEKDYDVL KRQFDAVKAE NDALLSHNKK LQSEILGLKG CREAASELIN LNKETEASCS 240 NRSENSSEIN LDISRTPPSD GPMDAPPSHQ QGGGGGGMIP FYPSVARPAG VDIDHLLHAS 300 VPKMEHHHGG PDTPSFGNLL CGVDEPPPFW PWADHQQFN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 174 | 182 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 4e-80 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG049410.1 |