PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG047780.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 612aa MW: 67070.9 Da PI: 7.6792

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG047780.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.6	7.9e-12	458	504	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ +I +Lq TRIDC4BG047780.8 458 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITHITDLQ 504 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
SATFGHRILR GSVLMKTEIE EEGIRGSWTE EDKSLCASVL GLDAFTYLTK GGGAISENLV 60 AASGLVGLQN KLQDLVEADG KSLCWNYAIF WQLSHTKSGE LVLGWGDGSC REPHDNEMNS 120 TTRGDIHDAS SLSQQRMRKR VLERLHTAFA GAEEEDDALR IDQVTDTELF FLASMYFAFP 180 RHVGGPGQVF ATGAPLWIPN NPHKVSPSNY CYRGFLASAA GFRTIVLLPF EAGVLELGSM 240 QNVLESAEAL ETIRSVFLGA SSKKAASGKH DENGSAQISP GLAKIFGKDL NLSRPLVNTG 300 ALPLKMNERS WDMQKNCGGE SLLLPNVRKG LQNFTWSQAR GLNSHHQKFG NGILVVKSET 360 SQRSNGAAHS PGLSPFQLQN SQQILTQPPP QSQTPRHIDF SVGSSSKSGV LTSQAALLGG 420 ENGSVDGLCK EQVAPTMEGQ QPRKRGRKPA NGRVEALNHV EAERQRREKL NQRFYALRAV 480 VPNISKMDKA SLLGDAITHI TDLQKKLKEM ESERDMFLES GMVDRRVQTP RPEVDIQVVQ 540 DEVLVRVMSP MDNYPINNVF QAFEEAEVKV GESKIASNNG KVMHSFVIKS PGSEQQTREK 600 LIAAMSRAMN SM

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

SATFGHRILR GSVLMKTEIE EEGIRGSWTE EDKSLCASVL GLDAFTYLTK GGGAISENLV  60
AASGLVGLQN KLQDLVEADG KSLCWNYAIF WQLSHTKSGE LVLGWGDGSC REPHDNEMNS  120
TTRGDIHDAS SLSQQRMRKR VLERLHTAFA GAEEEDDALR IDQVTDTELF FLASMYFAFP  180
RHVGGPGQVF ATGAPLWIPN NPHKVSPSNY CYRGFLASAA GFRTIVLLPF EAGVLELGSM  240
QNVLESAEAL ETIRSVFLGA SSKKAASGKH DENGSAQISP GLAKIFGKDL NLSRPLVNTG  300
ALPLKMNERS WDMQKNCGGE SLLLPNVRKG LQNFTWSQAR GLNSHHQKFG NGILVVKSET  360
SQRSNGAAHS PGLSPFQLQN SQQILTQPPP QSQTPRHIDF SVGSSSKSGV LTSQAALLGG  420
ENGSVDGLCK EQVAPTMEGQ QPRKRGRKPA NGRVEALNHV EAERQRREKL NQRFYALRAV  480
VPNISKMDKA SLLGDAITHI TDLQKKLKEM ESERDMFLES GMVDRRVQTP RPEVDIQVVQ  540
DEVLVRVMSP MDNYPINNVF QAFEEAEVKV GESKIASNNG KVMHSFVIKS PGSEQQTREK  600
LIAAMSRAMN SM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-131	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG047780.8