PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG046550.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 287aa MW: 32169.2 Da PI: 7.6544

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG046550.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.3	2.3e-27	26	112	3	71
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg TRIDC4BG046550.9 26 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpnnnieppdpdnpnaqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 112 689*****...*999********************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
RLPRRLPSGI KKKKRRAAAV GPDKGGRGLR QFSMKVCEKV ESKGRTTYNE VADELVAEFT 60 DPNNNIEPPD PDNPNAQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW KGLPRTSIND 120 IEELQADLAG VKGRIEKKSA YLQELQDQYL GMQNLINRNE QLYGSGNIPS GGVALPFILI 180 QTRPHATVEV EISEDMQLVH FDFNTTPFEL HDDSYVLKAL NSYGKEENAG TSEPISNGCE 240 GSSTPNFYRH QIQQSAMASN GTNRLPSSPP PPVPGILKGR VKHEHLY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	11	16	KKKKRR
2	12	17	KKKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-117	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG046550.9